Gene Psyc_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1048 
Symbol 
ID3514934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1239514 
End bp1240935 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content43% 
IMG OID637669738 
ProductDASS family divalent anion:Na(+) symporter 
Protein accessionYP_264335 
Protein GI71065608 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.486409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGA AAAAACTAGA TAGCCATCTT CCTAACGATG GCAACGAGTA TTTATTTACG 
GATACCTTTC CGAAAGGTAC AGGTAAAGGA TTGATGGTTG TCGCCATGGC GGCGGTTATC
AGTCTGTTTA TATATAATGT ATTGCCGTAC GATATTAGTG CCAATAAAGG CCTCGCCATG
TTGTTCTTTA TCGGCGTGTT ATGGTTAACC GAAGCGATAC ATGTGACGAT TACAGCGATA
TTGGTGGTTG TCATAGGAGC GCTGATCGGT TTACCGGATT TCGATGCTAA AATCGGCTTA
CAAAGCTTTG CCAACCCAAT AATTTATTTA TTCTTTGGTG GTTTTGCGCT AGCGGCAGCG
CTGCATATGC AGCAATTAGA CAGAAAGATT GCGCTCAAGA TTCTATCAAT GTCAGGTGGC
AATCTTAGAA ATGCGGTATT CTTAATATTT GGGGTAACCG CATTTTTATC GATGTGGATA
TCGAACACGG CTACTGCAGC GATGATGCTA CCACTGGCGC TTGGTATTCT AACGCAGGTT
GACCGCGAAA AAGACCGTGG TACTTTTGTA TTCGTTCTAT TAGGTATTGC TTATTCTGCC
AGCCTTGGTG GTTTGGGTAC GATTGTTGGT TCGCCACCCA ATGCTATTGC TGCCAAAGCG
CTTGATATCG CGTTTGTCGA TTGGATGAAG TTTGGTATTC CAATGATGTT AGTGCTGTTG
CCATTACTGC TCGGTGCAAT GTATTGGTTC CTTAAGCCTA ACCTTAATCG TCAAGTAACG
CTTAACGAAG ATGAGCCTAT TGCATGGAAT AAGCCACGTG TGCTAACGAT TATTGTCTTT
ATCGTAACAG CGCTGAGCTG GATACTCTCG AAACAAATTG GTGAAGCACT TAATATTGAT
GATGTTGATT CTATTGTGGC GCTGTTAGCG GCATCAGCGG TGGTCAGCTT AGGTTTGGTG
TCATGGAAGC AAGTTTCTGA TAACACCGAC TGGGGCGTAC TCATGTTGTT CGGTGGTGGT
ATTGCGCTAT CAACGGTTTT AAAAGTTTCA GGAGCATCTT TGGTTCTTGG TCAAGCAGTT
GCTAATGGAC TGTCCTCTGC ACCGCTTATC GTAGTGGTAC TTGCAGTCTC GGCATTCATT
ATATTCTTGA CAGAATTTGC TTCTAATACT GCTTCTGCAG CCTTGTTAGT CCCTGTATTT
GCTGCCATTG CTGAGCAAAT GGGTCTGCCA CCTGCAATAT TAGTAATGAT TATCGGTATC
GGTGCTTCTT GTGCGTTTAT GCTACCGGTT GCCACTCCAC CAAACGCTAT TGTCTTTGGT
ACAGGTCTTA TTAAGCAGAC AGAGATGATA CGTGTTGGTC TTATACTTAA TGTTATTGCT
ACATTTGTAC TAGGTTTGTG GGCATATTTT TTCTTGCTAT AA
 
Protein sequence
MSEKKLDSHL PNDGNEYLFT DTFPKGTGKG LMVVAMAAVI SLFIYNVLPY DISANKGLAM 
LFFIGVLWLT EAIHVTITAI LVVVIGALIG LPDFDAKIGL QSFANPIIYL FFGGFALAAA
LHMQQLDRKI ALKILSMSGG NLRNAVFLIF GVTAFLSMWI SNTATAAMML PLALGILTQV
DREKDRGTFV FVLLGIAYSA SLGGLGTIVG SPPNAIAAKA LDIAFVDWMK FGIPMMLVLL
PLLLGAMYWF LKPNLNRQVT LNEDEPIAWN KPRVLTIIVF IVTALSWILS KQIGEALNID
DVDSIVALLA ASAVVSLGLV SWKQVSDNTD WGVLMLFGGG IALSTVLKVS GASLVLGQAV
ANGLSSAPLI VVVLAVSAFI IFLTEFASNT ASAALLVPVF AAIAEQMGLP PAILVMIIGI
GASCAFMLPV ATPPNAIVFG TGLIKQTEMI RVGLILNVIA TFVLGLWAYF FLL