| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1004 |
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| Symbol | |
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| ID | 3515004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1197089 |
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| End bp | 1198297 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637669694 |
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| Product | serine peptidase |
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| Protein accession | YP_264291 |
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| Protein GI | 71065564 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0242585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAACT TACAAGCAAA GATTAAGCGC GATATTGACA GTCATGCGCT CATGAGCTGC
ACAGAGCTTG AGAACCAGCT GGCAAGTATC GATTTTAAAG CGCTATCACG CTATGGCGAT
GATGATGTTA ACGAGCCAGC CTATACTGTT GAAAATGGCG TAGCGACTAT TGATGTTCGC
GGTCTGCTAG TACCTGAGAC ATCAAGCGAT TATCGCTCAT GGGGTGTGAC AGGTTATGCA
AACTTAGCGG ACTACATACA GCAAGCCAAC GATGATTACG CAGTGACTAG CATTGTGCTA
GACATTGATA GCGGCGGCGG TTATGTCGCA GGTCTTGACG GTATTACTGA GACTATCTAC
CAGTCCGCAA AACCGATTGA AACTTTTGTT AGCGGTGATG CTTATTCTGC GGCGTACTGG
TTAGCAGCAA GCACGAGCAA GATTACAGCG TCTAAAAAAT CAGGTATCGG CAGTATTGGT
GTTTATGGTG ATCATGCCGA AAAATCAAAG GCGCTAGAAG ATGCGGGTAT CAAAATAAAG
CGCTTCCGAT CAGGTAGATG GAAGGGCGCA TTTAATTGGT TTACTCCATT ATCTGCTGAA
GAAGAAACAC GCTTACAAGA TGGTATCAAT GAGTCAGCAA GCATCTTTTT TAATTATGTG
GCAGCGCAGC GAAATATTGA TGTGAAAACC ATACAAGGCT GGGAAGGTGA TGATTTTAGC
GCCGCCAAAG CCAAAGAATT AGGTCTAATT GATGCGATTG CGGATAGCGT AGCAGTGTCA
AGCAGTACCA AGCAGAGCAA CAATAACCCC GAGGAGTACG ATTTGAACGA ACTTGAGAAA
GCGCAAGCAG AGATTGCTGC GCTAAAGGCT GATAAAGTCA AAGACGAGCA AGCGATTGCT
GATGCAAAAG CCGCCGCACT TGTAGCGCAA AACGCACTAG CGGCTTCGCA ATCGGCAACC
CGCCAAGCTG ATATCGATAA GCTAGCTACT GATACTGGTC GCACGTTTAC TGATGAGCAA
GTAACAGCAT TTAAGGCGAT GGATGAGGCG CAGTTTGCTA CTTCGGTTGT ATTGGCTACA
CCAGTCGCAC CGAAAGCGCC TGAACTGCCT GATGGCTTGG ATAAAGCGCA AGCAACCAAT
GGCCGTGAAG GTGGCGAAAG TAAAATCATG GCAGCAGTAG CCGCCGCAAA AGCACAAGGA
GCTAAATAA
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| Protein sequence | MINLQAKIKR DIDSHALMSC TELENQLASI DFKALSRYGD DDVNEPAYTV ENGVATIDVR
GLLVPETSSD YRSWGVTGYA NLADYIQQAN DDYAVTSIVL DIDSGGGYVA GLDGITETIY
QSAKPIETFV SGDAYSAAYW LAASTSKITA SKKSGIGSIG VYGDHAEKSK ALEDAGIKIK
RFRSGRWKGA FNWFTPLSAE EETRLQDGIN ESASIFFNYV AAQRNIDVKT IQGWEGDDFS
AAKAKELGLI DAIADSVAVS SSTKQSNNNP EEYDLNELEK AQAEIAALKA DKVKDEQAIA
DAKAAALVAQ NALAASQSAT RQADIDKLAT DTGRTFTDEQ VTAFKAMDEA QFATSVVLAT
PVAPKAPELP DGLDKAQATN GREGGESKIM AAVAAAKAQG AK
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