Gene Psyc_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0980 
Symbol 
ID3514923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1175124 
End bp1176590 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content44% 
IMG OID637669669 
ProductC-5 cytosine-specific DNA methylase 
Protein accessionYP_264267 
Protein GI71065540 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.407551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000325424 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATCCT TATTACCGCA TGAGCTAATA ATAGATAACT TTGCTGGTGG TGGCGGTACC 
TCAACTGGAC TTGAAGCTGC TTTTGGCCGT CCAGTTGATA TTGCTATCAA TCATGACCCT
GAAGCGATAG CTATGCACCG TATCAACCAC CCTGGCACTA AGCATTATTG CGAGTCGGTT
TGGGATATAG AGCCAAAGTC GGTTACTGGC AATCAACCTG TAGGCTTGGT GTGGCTATCA
CCTGACTGCA AACACTTCAG CAAAGCAAAA GGTAGTGTAC CAGTAGATAA GCGAATACGC
GGGTTAGCTT GGATAGCACT GAAATGGGCT GCTGATTGCA GACCTCGAAT TATCATGCTT
GAGAATGTCG AAGAGTTTAA AACGTGGGGC CCAATTGGTG AAGATGGTCG ACCATGTAAG
GATCGTAAAG GTCAGACATT CAAATCATTT ATACGTGCAC TACGTCGTCA GGGTTACGCA
GTTGAATATA AAGAGTTAAG AGCTTGTGAT TACGGCACCC CTACCATTCG TAAGCGGTTC
TTCTTGATAG CACGTCGTGA TGGTTTGCCT ATTGCTTGGC CAGTAGTAAC GCATGGCGAC
CCAGAATCAA CAGCTGTTAA AAAAAGAAAG TTACTACCTT GGCGAACAGC TTCTGAATGT
ATCGACTGGT CAATACCTAC GCCATCAATA TTTGAAACGG CTGAGCAGAT AAAAAGCAAG
TATGGCATAC GTGCTGTACG CCCATTATCT GACAATACAT GCAAGCGCAT AGCTGCTGGT
CTAATGCGGT ATGTCGTTAA TAATCCATCG CCATTTATAG TCAAGTTAAG AAAAGGGAAT
ATTGGACACG GTATAAATGA GCCGCTGCAT ACAATCACAT CTGGCGGTAC TCACTTTGGT
TTAGCTTCAC CGCTAATGAC AGAATGCGCC AATACTTCAT CGCCTAGATG TATGCCGGCT
AACGAGCCAT TGCGTACGAT ATGCGCTCAA ATTAAGGGCG GCCATCATGC GCTGATAGCG
CCTTTCATAG CTAAGAATTA TACAGGCGTG GTTGGTAGCG ATATTACAGA GCCGTTGCAT
ACCGTTACGG CCACTGACCA TAACAGCCTA GTGTCTGCAT TTTTGACAGC TTACTACGGC
AATGAAAAAA ACGGACAGTC TGTTAAAAGC CCAGTTCGTA CAGTAGTCAG TAAAGAAAGG
TTTGGATTGG TCACGGTTGA GGGTGTGGAT TATAAAATAG TTGATATCGG CTTTCGCATG
TTGCAGCCAA GAGAGTTGTT CCGCGCTCAA GGTTTTGGTG ACGATTACAT TATTGATAAA
GGTATTGATG AGTATGGCAA AACAATAAAA CTAACCAAGA CGGCACAAAC AAGAATGGTT
GGTAATTCGG TTTGTCCTCC CCTTGCCCAA GCCTTGGTAG AAGCTAACTT TAAACATGAA
TTTAATTACA GCGAGAAAAT AGCATGA
 
Protein sequence
MKSLLPHELI IDNFAGGGGT STGLEAAFGR PVDIAINHDP EAIAMHRINH PGTKHYCESV 
WDIEPKSVTG NQPVGLVWLS PDCKHFSKAK GSVPVDKRIR GLAWIALKWA ADCRPRIIML
ENVEEFKTWG PIGEDGRPCK DRKGQTFKSF IRALRRQGYA VEYKELRACD YGTPTIRKRF
FLIARRDGLP IAWPVVTHGD PESTAVKKRK LLPWRTASEC IDWSIPTPSI FETAEQIKSK
YGIRAVRPLS DNTCKRIAAG LMRYVVNNPS PFIVKLRKGN IGHGINEPLH TITSGGTHFG
LASPLMTECA NTSSPRCMPA NEPLRTICAQ IKGGHHALIA PFIAKNYTGV VGSDITEPLH
TVTATDHNSL VSAFLTAYYG NEKNGQSVKS PVRTVVSKER FGLVTVEGVD YKIVDIGFRM
LQPRELFRAQ GFGDDYIIDK GIDEYGKTIK LTKTAQTRMV GNSVCPPLAQ ALVEANFKHE
FNYSEKIA