Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0980 |
Symbol | |
ID | 3514923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1175124 |
End bp | 1176590 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637669669 |
Product | C-5 cytosine-specific DNA methylase |
Protein accession | YP_264267 |
Protein GI | 71065540 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0270] Site-specific DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.407551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000325424 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATCCT TATTACCGCA TGAGCTAATA ATAGATAACT TTGCTGGTGG TGGCGGTACC TCAACTGGAC TTGAAGCTGC TTTTGGCCGT CCAGTTGATA TTGCTATCAA TCATGACCCT GAAGCGATAG CTATGCACCG TATCAACCAC CCTGGCACTA AGCATTATTG CGAGTCGGTT TGGGATATAG AGCCAAAGTC GGTTACTGGC AATCAACCTG TAGGCTTGGT GTGGCTATCA CCTGACTGCA AACACTTCAG CAAAGCAAAA GGTAGTGTAC CAGTAGATAA GCGAATACGC GGGTTAGCTT GGATAGCACT GAAATGGGCT GCTGATTGCA GACCTCGAAT TATCATGCTT GAGAATGTCG AAGAGTTTAA AACGTGGGGC CCAATTGGTG AAGATGGTCG ACCATGTAAG GATCGTAAAG GTCAGACATT CAAATCATTT ATACGTGCAC TACGTCGTCA GGGTTACGCA GTTGAATATA AAGAGTTAAG AGCTTGTGAT TACGGCACCC CTACCATTCG TAAGCGGTTC TTCTTGATAG CACGTCGTGA TGGTTTGCCT ATTGCTTGGC CAGTAGTAAC GCATGGCGAC CCAGAATCAA CAGCTGTTAA AAAAAGAAAG TTACTACCTT GGCGAACAGC TTCTGAATGT ATCGACTGGT CAATACCTAC GCCATCAATA TTTGAAACGG CTGAGCAGAT AAAAAGCAAG TATGGCATAC GTGCTGTACG CCCATTATCT GACAATACAT GCAAGCGCAT AGCTGCTGGT CTAATGCGGT ATGTCGTTAA TAATCCATCG CCATTTATAG TCAAGTTAAG AAAAGGGAAT ATTGGACACG GTATAAATGA GCCGCTGCAT ACAATCACAT CTGGCGGTAC TCACTTTGGT TTAGCTTCAC CGCTAATGAC AGAATGCGCC AATACTTCAT CGCCTAGATG TATGCCGGCT AACGAGCCAT TGCGTACGAT ATGCGCTCAA ATTAAGGGCG GCCATCATGC GCTGATAGCG CCTTTCATAG CTAAGAATTA TACAGGCGTG GTTGGTAGCG ATATTACAGA GCCGTTGCAT ACCGTTACGG CCACTGACCA TAACAGCCTA GTGTCTGCAT TTTTGACAGC TTACTACGGC AATGAAAAAA ACGGACAGTC TGTTAAAAGC CCAGTTCGTA CAGTAGTCAG TAAAGAAAGG TTTGGATTGG TCACGGTTGA GGGTGTGGAT TATAAAATAG TTGATATCGG CTTTCGCATG TTGCAGCCAA GAGAGTTGTT CCGCGCTCAA GGTTTTGGTG ACGATTACAT TATTGATAAA GGTATTGATG AGTATGGCAA AACAATAAAA CTAACCAAGA CGGCACAAAC AAGAATGGTT GGTAATTCGG TTTGTCCTCC CCTTGCCCAA GCCTTGGTAG AAGCTAACTT TAAACATGAA TTTAATTACA GCGAGAAAAT AGCATGA
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Protein sequence | MKSLLPHELI IDNFAGGGGT STGLEAAFGR PVDIAINHDP EAIAMHRINH PGTKHYCESV WDIEPKSVTG NQPVGLVWLS PDCKHFSKAK GSVPVDKRIR GLAWIALKWA ADCRPRIIML ENVEEFKTWG PIGEDGRPCK DRKGQTFKSF IRALRRQGYA VEYKELRACD YGTPTIRKRF FLIARRDGLP IAWPVVTHGD PESTAVKKRK LLPWRTASEC IDWSIPTPSI FETAEQIKSK YGIRAVRPLS DNTCKRIAAG LMRYVVNNPS PFIVKLRKGN IGHGINEPLH TITSGGTHFG LASPLMTECA NTSSPRCMPA NEPLRTICAQ IKGGHHALIA PFIAKNYTGV VGSDITEPLH TVTATDHNSL VSAFLTAYYG NEKNGQSVKS PVRTVVSKER FGLVTVEGVD YKIVDIGFRM LQPRELFRAQ GFGDDYIIDK GIDEYGKTIK LTKTAQTRMV GNSVCPPLAQ ALVEANFKHE FNYSEKIA
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