| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0890 |
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| Symbol | tatD |
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| ID | 3514891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1064656 |
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| End bp | 1065465 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637669579 |
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| Product | TatD family Mg-dependent DNase |
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| Protein accession | YP_264177 |
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| Protein GI | 71065450 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.621664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.629167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAA CGAGATTGTT TATGTTTACT GATAGCCACT GTCATCTTAA TCGTTTAGAT
TTAACCAAGT ACGATGGTCA ATTGTCTGGC GCAATTGCTG CGATGAAAGA AGCTAATGTT
ACCCGTGCGA TGGCAATTAT GTGTGATTTT GCTGAATATG ATGAAATTGC CAATATTATC
AAGATTTATG GCGATGAAAC CTTAAACCTT GGTATGAGCG TCGGCATCCA TCCCTGTGAA
GATATCAGCG TCTTACAAGC GGTCACAATT GAGCGTTTGA TAGAAACCGC TGATACTGAT
CATGTGTGGG CAATAGGAGA GACGGGGCTA GATTATTACT GGTCAACGGA TAATAAAAAA
GCGCAACAAG CCAGCCTTGC CCATCATATT CATGCCAGCC AACACCTAAA AAAACCACTT
GTCGTCCATA TGCGTGATGC CAAAGAAGAT ACGATTGATA TCTTAAAAGC AGAAGGTGCT
GAGCATGGCA TTATTCATTG CTTTACTGAG GATTGGGAGA CGGCAAAACG CGCCTTAGAT
TTAGGGTTTT ATATCTCATT CTCAGGTATT GTCAGCTTTA AAAGCGCCCA AAATATCAAA
GATGCGGCAA AAAACATGCC AAGAGATAGA ATATTGATCG AAACGGATAG CCCCTATTTA
GCGCCTGTCC CCAAACGCGG CAGACCTAAT GAGCCGGCGT ACGTGCCTTA TGTCGCCAGT
TGTATTGCAG AGATGTATGG CTGTAGCGCG GAAGAGGTCG GTGCACTCAC TGCAAAAAAC
TTTGAGAATT TACTAGCACA GTATCATTAA
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| Protein sequence | MTTTRLFMFT DSHCHLNRLD LTKYDGQLSG AIAAMKEANV TRAMAIMCDF AEYDEIANII
KIYGDETLNL GMSVGIHPCE DISVLQAVTI ERLIETADTD HVWAIGETGL DYYWSTDNKK
AQQASLAHHI HASQHLKKPL VVHMRDAKED TIDILKAEGA EHGIIHCFTE DWETAKRALD
LGFYISFSGI VSFKSAQNIK DAAKNMPRDR ILIETDSPYL APVPKRGRPN EPAYVPYVAS
CIAEMYGCSA EEVGALTAKN FENLLAQYH
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