Gene Psyc_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0831 
Symbol 
ID3514331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp997970 
End bp999046 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content46% 
IMG OID637669518 
ProductNUDIX hydrolase 
Protein accessionYP_264118 
Protein GI71065391 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.809645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCT GTGCCTTTGT CCTATCTGAT GAAACGATCT TATGTCGTCA AACGCCTAAT 
GGCTGGTGGC CTTTGCAAGT TCAGCTACCA CACTCCGATG TCAGTAGTGA GCAAGCTTAT
CAATTGGGAC AGGTTACATT ATTTGACAGC TTAGCGCCAA ATAGCTGGCT ACCTAGTGAT
GTAGATAATA CTGATAACGC TAATGCCATT ACTGTACGAG CCAGCCGCGC CATCACTGAT
GATTATGCAA TAGCACATAA TATTGCCTTG CCTAGCATTT TAGACAGTAG TGACTTATTA
GGCAGTAGTG ACTTATTAGG CAGTAGTGAC TTATTAGGCA GTAGTGACTT ATTAGGCAGT
AGTGACTTAT TAGACAGTAG CGACGTAGAA AATAGCGGTA TTAGCCATAG CAACTCTCAG
AGCAGCTTGA ACGCTTTTAT ACCTTATCGG CAGCTTATCA CGCAGCTGCC CATAACATTA
GCTGCTCAGC TTAGCCAAGC CATACAGCTA TTACGTTGGC AGGCGGACAC ACGGTTTTGT
AGTCGCTGCG CCGCGCCCAC CATAGCTGCC AAATGCGGTG AGCGCGCGAT GGTTTGTGAC
GTTTGCCAAT TGCGTCAGTA TCCTCGCGTA CAGCCCTGCG TCATTACCGC TATTACTCGA
CTCAACCCGC AAACGGGTGA AATGCAAATT TTATTGGCCC ATCATCATCG GCATGGGCAA
CAAAAAACAG CAGCTCATTT ATCACAGTCG CCGCAACCGT TACTATACGG TTTGATTGCA
GGCTTCGTAG AAGTCGGTGA AAGCTTAGAG CATGCGGTGG TACGCGAGGT GGCAGAAGAA
GTGGGTCTTA GTTTGTCAGA TATTCACTAT GTGAGCAGTC AACCATGGCC ATTTCCCTCT
AATTTAATGC TTGGTTTTCG AGCATCTTAC GCTGGGGGTG ATATCGTTAT ACAAGAAGAC
GAGCTGTCAC ATGCCCAGTT TTTTGATCTA TCAAAGCTGC CAAAGATACC CTTTAAAGGT
AGCATTGCTT ATGAGCTGAT TACCCAAATT GCCAATGAGC AAGGTATCTC GCTTTAA
 
Protein sequence
MMTCAFVLSD ETILCRQTPN GWWPLQVQLP HSDVSSEQAY QLGQVTLFDS LAPNSWLPSD 
VDNTDNANAI TVRASRAITD DYAIAHNIAL PSILDSSDLL GSSDLLGSSD LLGSSDLLGS
SDLLDSSDVE NSGISHSNSQ SSLNAFIPYR QLITQLPITL AAQLSQAIQL LRWQADTRFC
SRCAAPTIAA KCGERAMVCD VCQLRQYPRV QPCVITAITR LNPQTGEMQI LLAHHHRHGQ
QKTAAHLSQS PQPLLYGLIA GFVEVGESLE HAVVREVAEE VGLSLSDIHY VSSQPWPFPS
NLMLGFRASY AGGDIVIQED ELSHAQFFDL SKLPKIPFKG SIAYELITQI ANEQGISL