Gene Psyc_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0768 
Symbol 
ID3514268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp919073 
End bp920608 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content44% 
IMG OID637669455 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_264055 
Protein GI71065328 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.377987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC AGCCTGATAC CGCCTCCGAT CCTTCTGCTC CCTTTGATCA TAGCACTCAT 
CAAAACGTGA CGCGCAAGGT ATCTGTTGCG GTCATTGGTG CTGGGACTGC CGGTCAAAAC
GCTTTTCGTC AAGCAAAAAA ATCTGTAGAA GATATCATTA TTATTAATGA TGGCTTTTGG
ACAACGACCT GTATTGCGGT GGGTTGTATG CCAAGCAAAT TACTCATTGC CGCCGCTGAC
CGCGCTCATG ATGCCAATCA TTCTGGTGAA TTTGGCATCC ATGCCACTGC TCACATAGAT
GGCAAACAAG TAATGGAACG GGTGCGCGCT GAGCGTGGTC ATTTTTCCAG CTACATCGAA
AAATACGTCG ATAGCTGGTC TGAGGATAGC AAAATAGCGG GACGTGCTTA TATTAATAAG
CAAGGTCTGA TTGAGGTCAA TGATGAGTTG ATACAAGCAG ATAAAATCAT TGTCGCTACT
GGCAGCTCGA CCTTTATTCC AGATGGCTGG GCTGACAAGC TTGGCGACAC CATGCTGACC
TCAGACACTG TCTTTGAGTT AGTCGACTTG CCAAAATCCA TGGCTGTCAT TGGTGCAGGT
GCCATAGGTT TAGAGCTTGC CCAAGCCTTT ACACGTTTGG GTGTAAAGGT AACGGTATTT
AATCGCGCCA AACGCGTTGC TGGTTTAAAA GATAATGATA TCAATAACAA AGCCATTGAC
TGCCTAAGTC GCGAGCTGAC CATGCACTTG GGGAGTAAAA TTACTGATAT CGGTCAAAAA
TTAGATGGAA ATATCGATAA AAATATAGAT AAAAAGAACA TCGCTGCATT TATTGACTAT
GAAGACAGCG CCGGTAAGGT ACAACAATGG CAAGGTGACT ATGTACTGGT CGCGACCGGT
CGACGCAACA ATATAGATAC ATTGGGTGTT GAAAACCTTG GCGTTGAGCT CGATGATAAA
AATCGCCCAA AAAACCTTGA TAAAAAAACT GGTAAAATCG GTGATTTAGA CGTTTATATT
GTAGGTGATG CCAATGCCCA TATTCCATTG CTTCATGTAG CAAGCGATGA AGGTTTCAGT
GCCGGAAGTA TGGTCTGCGG CAACAAAAAA GACGCCTATA TTCGTCCGCC TGCAACGCCA
TTTTCCATCG TCTTTAGTTC ACCGCAAATC GTCAATGTCG GTATGTCTTT ACCAGATATC
GAACAAGATC CAACGCTTGA ACACGTGATT GGGAAAGTCA ACTTTGACAA TCAAGGTCGT
AGCCGTGTTA TGGGTGTCAA CTGTGGTCTA TTGCATATTT ATGGCTGTGA AAAAACAGAC
AGAATCTTGG GCGCAAGCAT GGTTGGTCCG GATGCAGAAT ATATCGGTCA TATATTGGCA
ATGGCAATTA CCAACGACTT GAGTATCAAA GACATACTCG ACACCCCTTT TTATCACCCT
ACTATTTTAG AGGCTTTGCG TGCTGCCTTG CGTGATGTTC AGGATTTGAT GGAAATACCG
TATCAATCGC TTGATACCCA ACAACACAGC TCTTGA
 
Protein sequence
MNKQPDTASD PSAPFDHSTH QNVTRKVSVA VIGAGTAGQN AFRQAKKSVE DIIIINDGFW 
TTTCIAVGCM PSKLLIAAAD RAHDANHSGE FGIHATAHID GKQVMERVRA ERGHFSSYIE
KYVDSWSEDS KIAGRAYINK QGLIEVNDEL IQADKIIVAT GSSTFIPDGW ADKLGDTMLT
SDTVFELVDL PKSMAVIGAG AIGLELAQAF TRLGVKVTVF NRAKRVAGLK DNDINNKAID
CLSRELTMHL GSKITDIGQK LDGNIDKNID KKNIAAFIDY EDSAGKVQQW QGDYVLVATG
RRNNIDTLGV ENLGVELDDK NRPKNLDKKT GKIGDLDVYI VGDANAHIPL LHVASDEGFS
AGSMVCGNKK DAYIRPPATP FSIVFSSPQI VNVGMSLPDI EQDPTLEHVI GKVNFDNQGR
SRVMGVNCGL LHIYGCEKTD RILGASMVGP DAEYIGHILA MAITNDLSIK DILDTPFYHP
TILEALRAAL RDVQDLMEIP YQSLDTQQHS S