Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0661 |
Symbol | |
ID | 3514021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 783580 |
End bp | 784248 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637669351 |
Product | putative LmbE-like protein |
Protein accession | YP_263954 |
Protein GI | 71065227 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0532448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.938153 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA TAATTCTCGT AGTAGCTGCT CATACAGATG ATGAAGCGAT GGGTTGTGGC GGCACTATTG CTCGGCACAT AGCAGAAGGC GACGAGGTAC ATCTTTTATT TATGACTGAT GGTGTCGGTT CGCGTGAAGT TTTGGCTGAA GAAGTAATAG ACCGATCAAG TGCAGCACAA CAAGCCGCTA AAATTTTAGG AGTTAGCTCT TTTACTAACT TAAGCTTTCC TGATAATCGT ATGGATAGCG TAGCGCTTTT GGATATCGTG AAAGAGGTTG AAGTTAAAAT TTCTGAAATT AAGCCGGAAA TTATCTATAC ACACCATATA GGTGATCTAA ATATTGATCA TCAAGTGACG CACAAAGCAG TTATGACGGC CTGTCGACCT CAGCCAGGTT TCAGTGTGAA AACCATTTAC GCTTTCGAGG TGCTTTCAAG TACAGAGTGG CAAACATCCA ATTCAGCACT TTTTATACCT AATGTATTTA TAGATATAAC TGATTATTTA CCTGTAAAGA TGGATGCATC AAAAGCCTAT TATAATGAAA TGCGAGAGGT ACCTCATTCA CGCAGTCTAC AGCACATAGA ACTACTTGCT AGGCATCGAG GTTATACGGT TGGTGTTCAC GCAGCAGAAG CCTTTATGCT GGTTAGAGAA ATAAAGTAA
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Protein sequence | MSKIILVVAA HTDDEAMGCG GTIARHIAEG DEVHLLFMTD GVGSREVLAE EVIDRSSAAQ QAAKILGVSS FTNLSFPDNR MDSVALLDIV KEVEVKISEI KPEIIYTHHI GDLNIDHQVT HKAVMTACRP QPGFSVKTIY AFEVLSSTEW QTSNSALFIP NVFIDITDYL PVKMDASKAY YNEMREVPHS RSLQHIELLA RHRGYTVGVH AAEAFMLVRE IK
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