Gene Psyc_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0661 
Symbol 
ID3514021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp783580 
End bp784248 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content40% 
IMG OID637669351 
Productputative LmbE-like protein 
Protein accessionYP_263954 
Protein GI71065227 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0532448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.938153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA TAATTCTCGT AGTAGCTGCT CATACAGATG ATGAAGCGAT GGGTTGTGGC 
GGCACTATTG CTCGGCACAT AGCAGAAGGC GACGAGGTAC ATCTTTTATT TATGACTGAT
GGTGTCGGTT CGCGTGAAGT TTTGGCTGAA GAAGTAATAG ACCGATCAAG TGCAGCACAA
CAAGCCGCTA AAATTTTAGG AGTTAGCTCT TTTACTAACT TAAGCTTTCC TGATAATCGT
ATGGATAGCG TAGCGCTTTT GGATATCGTG AAAGAGGTTG AAGTTAAAAT TTCTGAAATT
AAGCCGGAAA TTATCTATAC ACACCATATA GGTGATCTAA ATATTGATCA TCAAGTGACG
CACAAAGCAG TTATGACGGC CTGTCGACCT CAGCCAGGTT TCAGTGTGAA AACCATTTAC
GCTTTCGAGG TGCTTTCAAG TACAGAGTGG CAAACATCCA ATTCAGCACT TTTTATACCT
AATGTATTTA TAGATATAAC TGATTATTTA CCTGTAAAGA TGGATGCATC AAAAGCCTAT
TATAATGAAA TGCGAGAGGT ACCTCATTCA CGCAGTCTAC AGCACATAGA ACTACTTGCT
AGGCATCGAG GTTATACGGT TGGTGTTCAC GCAGCAGAAG CCTTTATGCT GGTTAGAGAA
ATAAAGTAA
 
Protein sequence
MSKIILVVAA HTDDEAMGCG GTIARHIAEG DEVHLLFMTD GVGSREVLAE EVIDRSSAAQ 
QAAKILGVSS FTNLSFPDNR MDSVALLDIV KEVEVKISEI KPEIIYTHHI GDLNIDHQVT
HKAVMTACRP QPGFSVKTIY AFEVLSSTEW QTSNSALFIP NVFIDITDYL PVKMDASKAY
YNEMREVPHS RSLQHIELLA RHRGYTVGVH AAEAFMLVRE IK