Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0645 |
Symbol | |
ID | 3514385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 765000 |
End bp | 765902 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637669335 |
Product | IS30 family transposase |
Protein accession | YP_263938 |
Protein GI | 71065211 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.358598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.401127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAG TGACAGTTGA TGAAGTACGT CTTTATCAAA GAAACCAAAA AATATTTAGC ATCACCTGTA TGTGTCACGT ATTAGATGTC AAGCCATCAA GCTACTACAA CTGGATAAAT CGTGGTATCA GTAATCAGCA GATTCGTCGC AATCAGTGTG AGTTGCTGGT TCGCGTGGCT CATTATGAAA CTAAACAGCG CTATGGCTGT GAGCGCTTGC ATGCTCATCT TGCAGAGCAA GGGCATCATA TCAGTCAATA CATGGTCAGA AGCATCAAAG AACAGTACGG TATTACTTGC CGTCGTCACA AACGTTTTAA AATCACTACC AACTCTAATC ATAATAAGCT CGTATATCCA AACCTGATCG ATCAGAAGTT TGATACCAAT CGTCCTAACG AGTCGTGGGT TAGTGACATC ACTTATATCT GGACAAATGA AGGTTGGCTA TATTTGGCAG GCGTTAAAGA CATCTATACT AAAGAGCTGG TCGGCTATGC CATTAATAAG CGCATGACCA CTGCTCTAGT ATGCCGTGCA CTCAATATGG CAATTAAGAA TAAACGACCA AGCTCAAACC TGATTATTCA CTCTGACAGA GGTAGTCAGT ACTGTAGCCA TGAGTACCAT AAGATCATTA AGCAGCATAA ATTTAAGGGC TCGATGTCCA GACGTGGCAA TTGCTTTGAT AACGCGCCCA TAGAAAGCTT CTCGGGTGAG GAGCACTGCT CCGCAAGGAA GAATGAGTTG GTGTATCACC AAGACTATAA AACAAGATTC GAAGCCATTA GCGATATCAC TAAATATATT GAACTAGATT ACAACCAGAC TAGGATTCAA AAGGGTTTAG GCTATAGAAC GCCAAGACAG ATGTGGTTTG ACTTTTATCG TCAGGCTGCG TAA
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Protein sequence | MPAVTVDEVR LYQRNQKIFS ITCMCHVLDV KPSSYYNWIN RGISNQQIRR NQCELLVRVA HYETKQRYGC ERLHAHLAEQ GHHISQYMVR SIKEQYGITC RRHKRFKITT NSNHNKLVYP NLIDQKFDTN RPNESWVSDI TYIWTNEGWL YLAGVKDIYT KELVGYAINK RMTTALVCRA LNMAIKNKRP SSNLIIHSDR GSQYCSHEYH KIIKQHKFKG SMSRRGNCFD NAPIESFSGE EHCSARKNEL VYHQDYKTRF EAISDITKYI ELDYNQTRIQ KGLGYRTPRQ MWFDFYRQAA
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