| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0337 |
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| Symbol | |
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| ID | 3515054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 416416 |
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| End bp | 417003 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637669024 |
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| Product | hypothetical protein |
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| Protein accession | YP_263640 |
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| Protein GI | 71064913 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0256489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATAT CATATAGAAC ACTTTTAATA TGCTCAAAAG ATTGTAGACG CCATAATGAG
CACGGATTTA ATTTAGTAGA ATTAATCATA ACGGTTGCCA TTTTGGCAAT CATAGCAATG
ATTGCCACAC CCTATATCTT AACCCAATTA GCTCGTATGG AAGCCAAACG TATTGCAGGT
CAAATAGACA CTACCTTAAC TATGGCAAAA GCCGAGAGTT ACATTAGAAG ACAAAATTTA
CTGGTTTGCT TATCTAATGG TGGTGGTCTT TGCCATAGAG ACAGCTTTAA ACAGTTATTA
TTATTCTCGG ATAAAAATAA TAATAACAAT TATGATGTTG GTATTGATGA TTTGTTAGAA
GATCAAGCGC TAAACCCGAA ATACAGTACT TTATATTTGA GGGTCGGTAA TAACCGCCAT
TACACTAAGT TTTGGGGCGA TAGTGGCAGT CCTCGTGGGC ATTTCGGACA TATTAAATAC
TGTCCAACCT CAACCTACAA TCACACCATG TATCAAATCT CATTTAGCCA AGTCGGTCGC
ATTACTTATA AGCCCCATGA AGATCATCCG ACTGGATGTG GCACTTAA
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| Protein sequence | MTISYRTLLI CSKDCRRHNE HGFNLVELII TVAILAIIAM IATPYILTQL ARMEAKRIAG
QIDTTLTMAK AESYIRRQNL LVCLSNGGGL CHRDSFKQLL LFSDKNNNNN YDVGIDDLLE
DQALNPKYST LYLRVGNNRH YTKFWGDSGS PRGHFGHIKY CPTSTYNHTM YQISFSQVGR
ITYKPHEDHP TGCGT
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