Gene Psyc_0271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0271 
Symbol 
ID3514131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp328065 
End bp329204 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content44% 
IMG OID637668958 
Producthypothetical protein 
Protein accessionYP_263575 
Protein GI71064848 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA ACTGGACAAA AGAATTTATT ATTCAGCGCT TGCTGGCAAT TACTTTATTG 
GTCGTGCTCT TTGTGCTATG TTTTCAAGTG GTACGGTTTT TTATTGTGCC GGCACTGTGG
GGAGCAATTT TGGCGTATGT GACCTTTCCT ATTTATAACT TTTTTCATCA AAGGGTCAGA
TTTAGCTCAA ATTTTAGTGC AACGATTATG ACCGTCAGTA TTACTTTGAT GATAGGCGTG
CCATTGGTAG CCGGTATTTT TATCTTACAG CAAGAAGCGT TAAGCCTGAT CAGTAATTTG
GTCTATCGTA TTAAAGCGGG CTATCTGGAC GTGCCTGACT CTGTCAAAGA CTTGCCGGTG
ATAGGGCAGC AGGTCAAAGA TGTGCTTTGG AGAGTCAATA AAAACCCTGC AGGGACGCTA
GAGACTTTTC GTCTTTGGGT ACAGTCGCAT CTGTATTACG GCAAAATTGC CTTTGACGTC
GTGTTCAGTA GTCTTGCCAA ACTTGGTATG GCGCTTATGA CGTTGTTTTT CTTTTATCGT
GACGGCACAA GCTTGGTTCG CCAAATTCGC CAAGCGCTGC GTAATATCAT CGGCAATCGT
ATCGATGGTT ATATTGATTC TGTCGGTACC ACCACGCGTG CAGTAGTTTA CGGTATTGGG
CTGACAGCCT TAGCGCAGGC GCTATTGGCG GGTATCGGCT ATTATTTTGC CAGTGCACCA
AGTCCTATTT TGATGACGAT ATTGACGTTT ATCATTGCTT TAATCCCGTT TGGTACACCA
TTCGTTTGGG GCAGCATATC GCTTTTTCTG CTCAGTCAAG GGCATACGGT TGAAGGTATC
GGCTTGGCAC TGTGGGGCAT CTTAGTGATT AGCTGGGTTG ATAACCTTAT TCGTCCTATC
GTCATTAGTG GCGCGACCAA AATTCCTTTC ATTATCATCT TTATTGGGGT GTTAGGCGGC
CTGACTGCTT TTGGTTTTGT CGGTTTATTC ATCGGTCCTG TGGTGTTGGC AATCGGACTG
GCAGTATGGC GTGAATGGAT CTCGCAGCAT AAGAATGAGC TATTTGCTCA GCAAGAAGAG
TTGGCTCAAG GTAAAAACCT GATTAAAGTG AATGAGCCAA GCCAAGACAC ACCTTTATAA
 
Protein sequence
MIENWTKEFI IQRLLAITLL VVLFVLCFQV VRFFIVPALW GAILAYVTFP IYNFFHQRVR 
FSSNFSATIM TVSITLMIGV PLVAGIFILQ QEALSLISNL VYRIKAGYLD VPDSVKDLPV
IGQQVKDVLW RVNKNPAGTL ETFRLWVQSH LYYGKIAFDV VFSSLAKLGM ALMTLFFFYR
DGTSLVRQIR QALRNIIGNR IDGYIDSVGT TTRAVVYGIG LTALAQALLA GIGYYFASAP
SPILMTILTF IIALIPFGTP FVWGSISLFL LSQGHTVEGI GLALWGILVI SWVDNLIRPI
VISGATKIPF IIIFIGVLGG LTAFGFVGLF IGPVVLAIGL AVWREWISQH KNELFAQQEE
LAQGKNLIKV NEPSQDTPL