| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0233 |
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| Symbol | fimT |
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| ID | 3514716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 278992 |
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| End bp | 279450 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637668921 |
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| Product | type IV pilin protein |
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| Protein accession | YP_263538 |
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| Protein GI | 71064811 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAGCT CAGGGTTTAC TCTGATTGAG CTGATGGTCA CGATAGCTGT GCTCGCTATT
ATTGTGAGTA TTGCTGCACC TAGTATCAGC ACTCAGCTTG CCAATCAAAG GGTTAAGTCG
ACGACTGCGA CGCTAGAAAA CGCCTTAAAA GAGGCTAAGG CTGAGAGTAT TATTCGCCGT
CAAAAAGTGA CTGTGAGCTA CAATAATATG AGCAATCCGA AAGTTATCAT ACTCACAGGT
TCGGATACAA ATGCGAGTAC CATTGCCAGT TATAACTACA ATGCTAGTAG TACACTTACA
TCAAGCCCAG CGACTGCGAC TGTCACTTTC GAGCCCAGCA AACGAGTGAC CGCTACCATC
ACTTATACAA TTTGTGATAC GAATACGGCA GCTAATCCAC GACAAATCGT GGTCAGTAGG
GTTGCTAATA TTACCAACCA GATGGGAGTA ACCTGTTGA
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| Protein sequence | MSSSGFTLIE LMVTIAVLAI IVSIAAPSIS TQLANQRVKS TTATLENALK EAKAESIIRR
QKVTVSYNNM SNPKVIILTG SDTNASTIAS YNYNASSTLT SSPATATVTF EPSKRVTATI
TYTICDTNTA ANPRQIVVSR VANITNQMGV TC
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