Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0148 |
Symbol | dapA |
ID | 3514514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 177480 |
End bp | 178385 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637668832 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_263456 |
Protein GI | 71064729 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000206082 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000319288 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCACAG CATACGACGA TATTAAAACC CGACTACAAG GCTCAATGGT AGCCTTGATA ACGCCCATGC TTCGTGACGG CACGGTCGAT TATAAGCGTC TGGCAGACCT CATAGACTGG CAGATTGAAC AAGGCACTCA TTGCCTTGTC GCTGTTGGTA CGACTGGTGA ATCCGCAACC TTGTCAATGC AAGAGCACAG CGATGTGATT CGCTATTTTG TACAGCATGT TAAAGGTCGT GTACCGGTGA TTGCGGGTAC TGGCGCAAAC AATACGATGG AAGCTATTAA GCTGACTCAA GATGCAGCAG ATGCTGGTGC AGATTGTGCA TTATTGGTAG CCCCTTACTA TAATAAGCCG CCGCAAGAAG GCTTATATCA GCATTATAAA GCCATCGCTG AAGCCGTAAA TATCCCGCAA ATGCTGTATA ACGTCCCTGG GCGTACAGTC GTTGATATCG CGCAAGAAAC GGTTGAGCGC TTAGCTGATC TTGGCAATAT CGTTGCGATT AAAGATGCGA CAGGCTCAGT GGCACGCGGT GAGCAATTAA TCAAAGTGGT TGGCGATCGT CTTGTGGTTC TATCTGGCGA TGATGGCAGC GCACTTGAGC TAATGAAAGT TGGCGGTAAA GGTAACATCT CTGTCACTGC CAACGTGGTA CCAAAAGCCA TGAGCGAAAC CTTTACAGCA GCCTTGCGTG GTGATTTTGA CGCTGCCAAT CAAGTACATG ATGTCGTCAA GCACTTACAT CGTGACTTGT TTATCGAATC AAGCCCAATC CCAGCCAAGT ATGCTTTGCA CAAAATGGGT ATGATTGATA AAGGTATTCG CCTGCCGCTA GTATGGCTAG CTGAGCAACA TCATGCGACG ATTGATACAG CCTTGGTTCG TGCAAACTTA TTATAA
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Protein sequence | MSTAYDDIKT RLQGSMVALI TPMLRDGTVD YKRLADLIDW QIEQGTHCLV AVGTTGESAT LSMQEHSDVI RYFVQHVKGR VPVIAGTGAN NTMEAIKLTQ DAADAGADCA LLVAPYYNKP PQEGLYQHYK AIAEAVNIPQ MLYNVPGRTV VDIAQETVER LADLGNIVAI KDATGSVARG EQLIKVVGDR LVVLSGDDGS ALELMKVGGK GNISVTANVV PKAMSETFTA ALRGDFDAAN QVHDVVKHLH RDLFIESSPI PAKYALHKMG MIDKGIRLPL VWLAEQHHAT IDTALVRANL L
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