| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0139 |
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| Symbol | aroE |
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| ID | 3514505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 165855 |
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| End bp | 166721 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637668823 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_263447 |
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| Protein GI | 71064720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.204224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0449534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGC ATTTTATTGT TATTGGTAAT CCGATTGCTC ACAGCAAATC TCCTGAAATT
CATACGTTAT TTGGCGCGCA TGCAGGGCTT GATATTTGTT ATCAATGTCA ATATTGCCCT
GATGATCCAG CAAGCTTCAC GGCAGTCATT GAGGCGTTTT TTCATGGTGG CGGCGTGGGT
GCCAATGTGA CCGTTCCCTT TAAGCAAGTC GCTTATGAGT GCTGTGCAGC TCGTGGCGGC
TTATCTGAGC ATGCTAAAAT CGCCGGCGCG GTTAATACAC TATCATTAAA TCAAGCGCTA
TTGGCAAGTG GCGTCTCGCG AGCCGAGGCG TTATATGGCG ACAATACCGA CGGTCAAGGA
TTGGTCAATC ATATGCAGCG CTTAGGCTGG CCATTGAATG GTGCACGCAT TGCAATCATT
GGCGCAGGCG GCGCAGCGCG CGGCGTGGTA TTGCCGTTGA TAGAAGCTGG GATTGAAGCG
CTGACTATTG CCAATCGCAC GTTGAGTAAA GCAACAGAGT TGGTCAATGA GCTTAGCACA
GCCAGTGTAG TCATCCATAA CCAGCAAATT CAAACGTGCT GTACGGCTGA TTTAAGTGGC
GACTTTGATA TCATCGTCAA TGCCACTTCT ATTGGGCTAT CAGGTGAAAC GTTGCCATTA
GCCGATGAGC TAAACTGCCA ATACGCTTAC GATATGATGT ATGGGCGTGA GCTACCATTT
TTGCAGCATT TTGCCGCACG TGGCGCTCAG ACCTCTGATG GTTATGGCAT GCTTATCGGA
CAAGCAGCAT TAAGTTTTGA GTGTTGGACA GGACACGCTA TTGATGTTAC GCAGGCGACC
GCAGCATTAG AAAAATCATC AATATAG
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| Protein sequence | MTQHFIVIGN PIAHSKSPEI HTLFGAHAGL DICYQCQYCP DDPASFTAVI EAFFHGGGVG
ANVTVPFKQV AYECCAARGG LSEHAKIAGA VNTLSLNQAL LASGVSRAEA LYGDNTDGQG
LVNHMQRLGW PLNGARIAII GAGGAARGVV LPLIEAGIEA LTIANRTLSK ATELVNELST
ASVVIHNQQI QTCCTADLSG DFDIIVNATS IGLSGETLPL ADELNCQYAY DMMYGRELPF
LQHFAARGAQ TSDGYGMLIG QAALSFECWT GHAIDVTQAT AALEKSSI
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