Gene Psyc_0110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0110 
Symbol 
ID3514480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp131165 
End bp132595 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content43% 
IMG OID637668794 
Producthypothetical protein 
Protein accessionYP_263418 
Protein GI71064691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG ATGCTATGGA TAAGAATATA CCCCAATCTG AACCAAATTC GCTTAGCCAT 
TTGGCAAGAG AGTCTGCTGT TTGCGTGCTT ATCGGTCATA GTATCGAGGC GGTGACCAGT
GCTGTGGTAC TGGCAAGTCT TGGTCAACGC GTTCATTTAT ATGCAGATAA GGAGTTATTG
GCGCAGCAGC TACAGCAATA TAGCTTTGAG CATCACTTAC AAGCGTTATG GCAGATGTAT
ACGCAGCAGC ATCACATTAT GAGTTATGCA CTGCCCAATG CTGCTGATAA GCTAATCCAG
TGCTATGAAA CAGCAAACCA TAATAACAGC CTTTTTACCA ATGAGAGCCA AGAAATTAAT
GAGAGCCAAG AAATTAATGA GCCAAAAACA GTAGCACTAT ATTGGTTATT TTTAGACAGT
ATCGATTCAG TATGGATAGA GGATGATTGG CTTACGGCTT TCAATCATAG TCATCAGCAG
GCGCAACCGC TAATGATGAG TGGTATTAAG CAGCTTGGCA CTATAGCTGC ATTGTCTCAG
CGCTTAAAGC GCGCTTGGGT CTATTATCTA CCGTTCGTCT TCTTAAAAGA TGGCGACGCT
TATAGCTCGA TGTTAAATCC GTCATTATGG TTACTCGGTG AAAAAACGCC TAATAGCCGT
CATCATTTGG GTATGCTACA GCCATTAATG CAGCATGCGC GTGCTACTCA TTATGCTGAT
ATTGCGACCA TAGAGTTTGC GCGCAGTAGC ATCATGGCGA TGCTGGCAAC GCGGGTCAGT
TTTATGAATG AGATGTCTCG CTTGGCGGAT AGTCAAAAAG TCGATATCCA GCAGGTCAGT
CATATCATGG GACTTGATGA GCGCGTGGGT AATAGCTACT TACAAGCAGG TTGGGGCTTT
GGTGGTCATA CCTTACCGGC TGAATTGTTA ATGTTACAGC AATCAAGCAA TGAGCAAAGC
TTAGCCATGC GATTATTACA GTCGGTCATC CACATCAATG AAGATCAAAA AGAATTGATC
TTCCGCAAAT TTTGGCAATA TTTTGATGGT TTTATCGACA ATAAAACGGT CATGATTTGG
GGCGGTAGTT ATAAAGCCGG CTCAGGGCGG ACGGCAGGTT CAGCCATTCA TCCCTTATTA
GCGTTACTGT GGTCTTATAA TATTCGTACT TTGGTCTATA GTGATAAAGC ACAGACTGAG
CTCGCGGCAC TTTACGGACA ACAGCCTTTA CTTGAATTGA TGGACAGTCC TTATCAGCAG
TTGGATAAAG CGCAGGCGGT CTTTATTGTC AGTTGGTCAC CGGAAGATCA ACTTGATGTG
ACATCATTAA ATCAGCAAGC AATACCTGTA TTTGATGCAC AAAATGTATT AACAAGTTTG
CAAATTGACA GCTTAGTTGG TGATTATATG GGTATTGGTC GCGCTAAGTA A
 
Protein sequence
MSTDAMDKNI PQSEPNSLSH LARESAVCVL IGHSIEAVTS AVVLASLGQR VHLYADKELL 
AQQLQQYSFE HHLQALWQMY TQQHHIMSYA LPNAADKLIQ CYETANHNNS LFTNESQEIN
ESQEINEPKT VALYWLFLDS IDSVWIEDDW LTAFNHSHQQ AQPLMMSGIK QLGTIAALSQ
RLKRAWVYYL PFVFLKDGDA YSSMLNPSLW LLGEKTPNSR HHLGMLQPLM QHARATHYAD
IATIEFARSS IMAMLATRVS FMNEMSRLAD SQKVDIQQVS HIMGLDERVG NSYLQAGWGF
GGHTLPAELL MLQQSSNEQS LAMRLLQSVI HINEDQKELI FRKFWQYFDG FIDNKTVMIW
GGSYKAGSGR TAGSAIHPLL ALLWSYNIRT LVYSDKAQTE LAALYGQQPL LELMDSPYQQ
LDKAQAVFIV SWSPEDQLDV TSLNQQAIPV FDAQNVLTSL QIDSLVGDYM GIGRAK