Gene Psyr_5010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5010 
Symbol 
ID3370562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5942711 
End bp5943658 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content59% 
IMG OID637655379 
Producthypothetical protein 
Protein accessionYP_238075 
Protein GI66048234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.231519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG AAGACTACAT GTCGTTCATC GATGCGTGGG AAGGTCGCGC CACCATTCGT 
ACGCGTCCAC GCAGGATGGT CGAGAACGAT GAAAAACTCA TCTACCCCCT CAGCCGACAG
CCGCTGGTAC TCAGTGACAC CTTCACCCGC GAGTGCACGC ATTGGCGCGA TTACGCGCTG
GTGCAGAGCC TCTACAAGTT CATCAACGAT GTGGTGATCT TCGAGACCGA GATCGTCGAC
AGGACCGCGC GCAGTATCGC CAAGGACAAC TTCGCGATTC GCTTCCCGTT TGCCTGTCGC
TATGACGCGA TGACGGTGGT GGTCGATGAG GACTACCACG CACTGGTGGC GATGGACTTC
ATGCAACAGA CCATCGCCCT GACAGGTATT GAGCCTATCC CGTTGCCGGA CGAGATTGAA
CTCAGCCGGG CCATTCCCGC CGCATTGGCT CTGGCCCCCG AGCATCTGCG CAGCGCGGTG
GAGCTGATCT GTGTCGCCAT CGCGGAGAAC ACCGTGACCA ATGACGTGGC GGCGTTTGCC
AAGGACGAAT CGGTCAAGCA ATCGGTGAAG GGGCTGATGG CCGACCACTT GCTGGACGAG
GGGCGTCACT CGGGCTTCTG GGCGCGGCTG GTACGCATCT ATTGGCATAC CGCTCCCCAA
CAGGACCGGG AATCCATCGC CCGCATCATG CCGGTGTTCA TCGCTCAATA CCTGACCAAC
GATATTCAGA ATGGCTTCGA CTTCACCCTG ATCGACCACC TGCAGGTGCC GGACACCGTC
AAGCAGGCGC TCAGGGATGA GACCAGGGCT GTGAGTTTTC CAGTCAACCG CCATCATCCA
CTGGTGGCCA ACATCGTGCG TTTCTTCAAG AACAGCTCGA TGCTGGACGA TCCTTGTGTG
CAGCGGGCGC TGACGGACTA TCTGCCTGCG CAGAGGGCGC TGCAATGA
 
Protein sequence
MKAEDYMSFI DAWEGRATIR TRPRRMVEND EKLIYPLSRQ PLVLSDTFTR ECTHWRDYAL 
VQSLYKFIND VVIFETEIVD RTARSIAKDN FAIRFPFACR YDAMTVVVDE DYHALVAMDF
MQQTIALTGI EPIPLPDEIE LSRAIPAALA LAPEHLRSAV ELICVAIAEN TVTNDVAAFA
KDESVKQSVK GLMADHLLDE GRHSGFWARL VRIYWHTAPQ QDRESIARIM PVFIAQYLTN
DIQNGFDFTL IDHLQVPDTV KQALRDETRA VSFPVNRHHP LVANIVRFFK NSSMLDDPCV
QRALTDYLPA QRALQ