Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_5005 |
Symbol | |
ID | 3370557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5936543 |
End bp | 5938108 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637655374 |
Product | hypothetical protein |
Protein accession | YP_238070 |
Protein GI | 66048229 |
COG category | [S] Function unknown |
COG ID | [COG5339] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTCT CTCGCGGCTT TCAATCGGCG CTGCCGGTCC CGGTACGACT TTCCCATCAT CAGAACGGAT ATCTTCACGT CACTATGAAT AAATCAGCAG GTATAGCGAT TGGCGTCATC GTCGTAGCGG GCGCACTGGC TACGGCCGGT GCCTGGTACA CCGGCAATCA ACTGGAAGGC GCGCTGAACG ACTCGATCAG CAAGGCCAAT CAGGAGCTGG CCAAGTCGTT CAAAGGCACG GACACCAGCG TCAAACTGGA AATGCTCTCG CTCGACAAGC ACTTCTTCAG CAGCACGGCG CACTACCGCG TCGACATCCA GAACCTGTCC GATAGCACCC AGGGCGGCCA GTTCTTGTTT GTCGACCATA TCGAGCACGG CCCCATTCCG CTGTCGCATC TGAAAACCCT GAACCTGCTG CCGGTCATGG CCCTGAGCAA TTTCCAGATG GAAAAAAGCC CAAGCGCCGA GAAATGGTTC GCCATGAGCA AGGACGTTCC ACCGCTCACG GGTCAGGCCA GCATCGGCTA TGACCGCGCC ACCAAAGGCA CGCTGCAGAT GGCTCCGCTG GAAATGACCG ACGTCGACGG CACGTTCCGT TTTTCAGGTC TGGACCTGAA CGCCGAGTCG TCCGCCGACG CGGAGAAATT CAGCCTTGCG GGCAACATGG ACAATTTGCA ACTCAATGTC GCGTCGCCCG ACGGCCCGGT CAGCATCGAA ATCAAAGGCA TGACCTTCGA CACGGGTGGT ACCAAAGGCA AGTCCGGTTT CTATCTGGGC CACACCAACA TGAAAATCCA GAACGCGGGT TTCCAGGTGG TGGGCAAGCC ACAGGTGCAG ATTCGCGATT TCACCAACAC CAACCTGGCG CAGGAAGATG CCGGTAACCT GGCAGCCCAG ATCAACTACG ATGCCGGCAT GATTGCCTAC GCGGGCAAGG ACGTCGGTTC TGCGCACATG GGCTTCAAGA TCGCCAACTT CGATGTGCTG GCGACTCAGG CGCTGTATCA GTTGTATCAG GATAAAATCC TGCCTCAGCA GCAACAGGCC GCGCAGGAGA AACGTCCGTT CCGCCTGGAG CTGAGCCCGG CTGATCAGGA GCTGATGAAC ACCCAGATGA AAACGCTGCT GGCGGCCAAA CCGCACATCG AGCTGGAAAA GCTCTCGCTC AAGACCAGCA ACGGTGAAAG CCACATGCGT ATCGCCGTGG ACCTGGCCGA TCCAGGCCCG CTCGATCAGC CTTCCGATGC GCTGCTCATG AAGAGCCTGG GCGAAGTCAA CGCCAGGGTC GTCCTGTCCA AGCCGATGAT TCGCGACCTC GCGACCCAGC AAGCCATGCG TGAAGGCCAG ACCGACCTCA AGGTCATCGC CGATCAGGCC AAGGCCGCTG GCGACATGGC CAGCGCCATG GCCGAGATGA TGCAACTGGC CAAGGTCGAC GGCGACAACA TCGTCTCCGA CCTGCATTAC GCCAACCAGA TGGTCGACTT CAATGGCCAG AAAATGACCG TGCAGCAGTT CATGAGCAAC GTCATGGGCA AGGTCGGCGT GCTGGGTAAC CAGTAA
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Protein sequence | MIVSRGFQSA LPVPVRLSHH QNGYLHVTMN KSAGIAIGVI VVAGALATAG AWYTGNQLEG ALNDSISKAN QELAKSFKGT DTSVKLEMLS LDKHFFSSTA HYRVDIQNLS DSTQGGQFLF VDHIEHGPIP LSHLKTLNLL PVMALSNFQM EKSPSAEKWF AMSKDVPPLT GQASIGYDRA TKGTLQMAPL EMTDVDGTFR FSGLDLNAES SADAEKFSLA GNMDNLQLNV ASPDGPVSIE IKGMTFDTGG TKGKSGFYLG HTNMKIQNAG FQVVGKPQVQ IRDFTNTNLA QEDAGNLAAQ INYDAGMIAY AGKDVGSAHM GFKIANFDVL ATQALYQLYQ DKILPQQQQA AQEKRPFRLE LSPADQELMN TQMKTLLAAK PHIELEKLSL KTSNGESHMR IAVDLADPGP LDQPSDALLM KSLGEVNARV VLSKPMIRDL ATQQAMREGQ TDLKVIADQA KAAGDMASAM AEMMQLAKVD GDNIVSDLHY ANQMVDFNGQ KMTVQQFMSN VMGKVGVLGN Q
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