Gene Psyr_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4872 
Symbol 
ID3370422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5783922 
End bp5785244 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content51% 
IMG OID637655239 
Producthypothetical protein 
Protein accessionYP_237937 
Protein GI66048096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAG TTTTAATGAT GAAAAGTACA AGTAAAGCGG GCGGGATCGA GTATGAGTTC 
CAGGCACCGT TCCGAGCGCC TCGTGATATG GGTCACCAGA CAAAAATATT GGCGCTTGAT
TCGGGTATGC GTTATTTGAC AGACCTGGAA CACAGTAGCA GCAGAGTATT TCTTTCCAGG
TTATCCAACG ACGGCACCCC TGATCTGAGC TTCGCTCCGG ACGGTTACAG GACGGAGAGC
GTGGAGATGG CATTTGATGG GCTCGAGCCG GGGCTGGTGG TGCGGAAAGA CGGAGGAGTT
GTTGCCGCTC TGTGTAATGA CAATGAGTTG GGGCTGGTGT GTTTTAAAAC GGACGGTACG
CTTGATCCAG ACTTTGGAAC TGACGGGATA ATTGTCCATT CCTATTGGGC AGTAGGTATT
ACTCAACGCA GCGGGCAGCT TGACGATGTT GACTCGGACG ATAAGAGTGC TCCCAGCGGG
AAAGACGTTG CTGGCGCTAG AGGCACTATA GCGCCGGGGA TGGATGGAAG AATCTACGGT
TTGATTGGAG GCCGAACCTC TTCTCCGGAT GCAGTGATAC GTTGTCTGGG TAACGGCGAA
CTGGATGCTG GATTCAACGA GACTGGAACG CTACCCATTA CCTACACAAC GTATGACGCA
GTGGTGTCGG GCGTTGTCCC CACCCCGGAT GGCGGTATAG CGGTTACGGG CAGGCTCAGG
GGGGCAGTGT TCGTAAGTTG CTATAAAGAA GATGGTTCCT TGAACGTGCA ATTTGGTGAG
GGCGGATTTG CAATATTCGG TCCTGAGCAC TTTGGCTACA CCGATGAAGA AATTCTCCAG
CTGGAATTTA ATCATATTGC AGTATTGCCA GGTGGCGGAT TTATAGTGAG TGGATATTTG
TCCGCTATCA ACCCTACGCT CACCTACGGT CTTCTGGTCG CGGTGGACAG TACAGGCAAG
CTGGCTCAGT CCTTTAATAA CGGTAAGCCA GTAATGTTTG AGCTGGCGCC ACGTGAGGTG
GATTTCATAT TCGGGGGCGT CGTGTTGCAA GCGGATGGGA AAATCCTGGT GGGTGGCGGT
TTAACCGCAA GGAACCCGAC ATATAGACGG GACGTATTCG TCATTCGATA CTTACAGACT
GGGGAGCTCG ACTTGAGTTT TGCGGGGAGA GGGTGGGTGC AGTTCAGCCC GTTTGGCAAT
GTGGTAAGTT ACCTTAATAG TATTAGTATT GATAAGGATC AGAAAATCTT GCTGGCAGGG
GATGGTGGTC CTGACAATAA CCTGTCTTCA ATGACTGGCT TTGTCATGCA GTTAGCCAGT
TAG
 
Protein sequence
MDGVLMMKST SKAGGIEYEF QAPFRAPRDM GHQTKILALD SGMRYLTDLE HSSSRVFLSR 
LSNDGTPDLS FAPDGYRTES VEMAFDGLEP GLVVRKDGGV VAALCNDNEL GLVCFKTDGT
LDPDFGTDGI IVHSYWAVGI TQRSGQLDDV DSDDKSAPSG KDVAGARGTI APGMDGRIYG
LIGGRTSSPD AVIRCLGNGE LDAGFNETGT LPITYTTYDA VVSGVVPTPD GGIAVTGRLR
GAVFVSCYKE DGSLNVQFGE GGFAIFGPEH FGYTDEEILQ LEFNHIAVLP GGGFIVSGYL
SAINPTLTYG LLVAVDSTGK LAQSFNNGKP VMFELAPREV DFIFGGVVLQ ADGKILVGGG
LTARNPTYRR DVFVIRYLQT GELDLSFAGR GWVQFSPFGN VVSYLNSISI DKDQKILLAG
DGGPDNNLSS MTGFVMQLAS