Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4872 |
Symbol | |
ID | 3370422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5783922 |
End bp | 5785244 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637655239 |
Product | hypothetical protein |
Protein accession | YP_237937 |
Protein GI | 66048096 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGGAG TTTTAATGAT GAAAAGTACA AGTAAAGCGG GCGGGATCGA GTATGAGTTC CAGGCACCGT TCCGAGCGCC TCGTGATATG GGTCACCAGA CAAAAATATT GGCGCTTGAT TCGGGTATGC GTTATTTGAC AGACCTGGAA CACAGTAGCA GCAGAGTATT TCTTTCCAGG TTATCCAACG ACGGCACCCC TGATCTGAGC TTCGCTCCGG ACGGTTACAG GACGGAGAGC GTGGAGATGG CATTTGATGG GCTCGAGCCG GGGCTGGTGG TGCGGAAAGA CGGAGGAGTT GTTGCCGCTC TGTGTAATGA CAATGAGTTG GGGCTGGTGT GTTTTAAAAC GGACGGTACG CTTGATCCAG ACTTTGGAAC TGACGGGATA ATTGTCCATT CCTATTGGGC AGTAGGTATT ACTCAACGCA GCGGGCAGCT TGACGATGTT GACTCGGACG ATAAGAGTGC TCCCAGCGGG AAAGACGTTG CTGGCGCTAG AGGCACTATA GCGCCGGGGA TGGATGGAAG AATCTACGGT TTGATTGGAG GCCGAACCTC TTCTCCGGAT GCAGTGATAC GTTGTCTGGG TAACGGCGAA CTGGATGCTG GATTCAACGA GACTGGAACG CTACCCATTA CCTACACAAC GTATGACGCA GTGGTGTCGG GCGTTGTCCC CACCCCGGAT GGCGGTATAG CGGTTACGGG CAGGCTCAGG GGGGCAGTGT TCGTAAGTTG CTATAAAGAA GATGGTTCCT TGAACGTGCA ATTTGGTGAG GGCGGATTTG CAATATTCGG TCCTGAGCAC TTTGGCTACA CCGATGAAGA AATTCTCCAG CTGGAATTTA ATCATATTGC AGTATTGCCA GGTGGCGGAT TTATAGTGAG TGGATATTTG TCCGCTATCA ACCCTACGCT CACCTACGGT CTTCTGGTCG CGGTGGACAG TACAGGCAAG CTGGCTCAGT CCTTTAATAA CGGTAAGCCA GTAATGTTTG AGCTGGCGCC ACGTGAGGTG GATTTCATAT TCGGGGGCGT CGTGTTGCAA GCGGATGGGA AAATCCTGGT GGGTGGCGGT TTAACCGCAA GGAACCCGAC ATATAGACGG GACGTATTCG TCATTCGATA CTTACAGACT GGGGAGCTCG ACTTGAGTTT TGCGGGGAGA GGGTGGGTGC AGTTCAGCCC GTTTGGCAAT GTGGTAAGTT ACCTTAATAG TATTAGTATT GATAAGGATC AGAAAATCTT GCTGGCAGGG GATGGTGGTC CTGACAATAA CCTGTCTTCA ATGACTGGCT TTGTCATGCA GTTAGCCAGT TAG
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Protein sequence | MDGVLMMKST SKAGGIEYEF QAPFRAPRDM GHQTKILALD SGMRYLTDLE HSSSRVFLSR LSNDGTPDLS FAPDGYRTES VEMAFDGLEP GLVVRKDGGV VAALCNDNEL GLVCFKTDGT LDPDFGTDGI IVHSYWAVGI TQRSGQLDDV DSDDKSAPSG KDVAGARGTI APGMDGRIYG LIGGRTSSPD AVIRCLGNGE LDAGFNETGT LPITYTTYDA VVSGVVPTPD GGIAVTGRLR GAVFVSCYKE DGSLNVQFGE GGFAIFGPEH FGYTDEEILQ LEFNHIAVLP GGGFIVSGYL SAINPTLTYG LLVAVDSTGK LAQSFNNGKP VMFELAPREV DFIFGGVVLQ ADGKILVGGG LTARNPTYRR DVFVIRYLQT GELDLSFAGR GWVQFSPFGN VVSYLNSISI DKDQKILLAG DGGPDNNLSS MTGFVMQLAS
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