Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4858 |
Symbol | |
ID | 3370408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5764268 |
End bp | 5766655 |
Gene Length | 2388 bp |
Protein Length | 795 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655225 |
Product | penicillin amidase |
Protein accession | YP_237923 |
Protein GI | 66048082 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA GCCTCTTCAT TCTAGCCATC ATCATCGCCC TGCTTGCGGG TGGCGCGGGC TGGTACGTAA ATAGCAAACT GCCGGTACGT GATGGCGAGA TCGCCATGAG CCGTCTTCAG GCCCCCGTCA CCCTGCGCTA CGACGAGCGT GGCGTGCCGC ACATCCGCGC CGAGAACGAA GCCGACCTTT ACCGTGCGCT GGGCTATGCC CATGCTCAGG ACCGACTGTT CCAGATGGAA ATGCTGCGTC GCCTGGCACG TGGCGAGCTG GCAGAGGTAC TGGGGCCGAA TCTGCTCGAG ACCGACAAGC TGTTTCGCAG CCTGCGCATT CGTGAGCACG CGGATGCGTA TGTCGCACGT CAGGACAAGA ACACCCCGAC CTGGAAAGCG CTGGAAGCCT ACATCGACGG CATCAACCAG TATCAGGACA CCCACGCAAG GCCGATGGAG TTCGACGCGC TGGGCATTCC CAGACGGCGG TTCACCCCAG AGGACACGGT CAGCATCGCC GGCTATCTGG CTTACAGCTT TGCCGCGGCG TTCAGAACCG AGCCACTGCT GACCTACGTC CGTGATCAGC TGGGTCCGGA GTACTTGAAA GTCTTCGACC TGGACTGGCA CCCGGACGGC ATGCTCGACT CGAAACCGGC ACTGGCCGAC GCCGACTGGA AGGGCCTGAA TCAGCTCGCG CAGTTGAGTC ACAAGGCGCT TGAAGACGCT GGCCTGCCGC AGTTCGAAGG CAGCAACGCC TGGGTGATTT CCGGCAGCCG CACGCAAAGC GGCAAGCCGA TCCTCGCCGG TGACCCGCAC ATCCGCTTCT CGGTGCCTTC GGTATGGTAC GAAGCGCAGT TGTCGGCGCC GGGCTTTGAG CTGTACGGGC ACTTTCCGGC GCTCAACCCG TTCGCGTTGC TGGGCCACAA CATGGACTTC GGCTGGAGCC TGACCATGTT CCAGAATGAC GACGTGGACC TGATTGCCGA GAAGACCAAC CCGGATAACC CGAATCAGGT CTGGTACCAC GGTCAGTGGG TGGACATGAA ACGCACCGAG CAGCAAATCG CCGTGAAAGG CCAGGCGCCG GTCACACTGA CGCTGCTCGA ATCGCCGCAC GGCCCTATTG TCAACAACGT GATGGGCAAG AACGCCGGCC AGGCGCCAAT TGCGATGTGG TGGTCTTTTC TGGTGTCTGC CAACCCGGTG CTGGACGGTT TTTACGAGGC CAACCGCGCC GATACGCTGG ACAAGATGCG TAGCGCGGCC GAGAAGATTC AGTCACCGGG CCTCAACATC GTCTGGGCCA ACGCCAAAGG CGATATCGGC TGGTGGGCTG CGGCGCAATT GCCGATCCGC CCGCAAGGCG TCAACCCCAC CTTCATTCTG GACGGCAGCA CGGCGCAGGC CGATAAGCTC GGTTTTTACC CGTTCAGCGC CAACCCGCAC GAAGAAAACC CGGCGCGTGG TTACATCGTC TCAGCCAATT TCCAGCCGCT GTCGCCGACC GGTATGCAGA TTCCCGGCTA CTACAACCCG GCCGAACGTG GCCAGGAGCT GAACCGGCAA CTGAGTGACG CCAGCGTCAA GTGGGACCTT GCCGCCAGCA AGGCGCTGCA ACTGGACACG CAGACCGACT ATGCACCGAG CATTCTCAGG CCATTGATTC CGGTACTGCG CAGTGTTGTC AGCGACCCGG ACGAACTGGC ACTCGTGGAA CGACTGGCCA GCTGGAAAGG CGATTACCCT GTCGATTCGG TGGGCGCCAC GCTGTTCAAT CAGTTCCTGT TCGACCTGAC CGAAGAGACC TTTCACGACG AACTGGGCGA CGCGATGTTT GAAACCCTGC TGTCGAGCCG CGTAATGGAC GCTGCCCTGC CGCGCCTGGC CGCCGATGCC GATTCGCCGT GGTGGAACAA TCGCAATTCA CCCCACGAAG AAAGCCGCGC CAACACCGTC AAGGTGGCCT GGCGCGCCAG TGTTTCGCAT TTGAGGTCGC TGTACGGCAC CAACCCGGAC GAATGGGTGT GGGGCAAGGC GCATACCCTG ACCCAAGGCC ACCCATTGGG TTCGCAGAAG CCGCTGGACA TGATTTTCAA CGTCGGCCCG TACGCAGCGC CGGGCACGCA TGAAGTGCCG AACAACCTGT CGTCGAGCAT CCGCCCTGCC CCGTGGCCAG TCGGCTACGG CCCCTCGACC CGCCGCCTGA TCGACTTCGC CGACCCGGCA CATAGCCTGG GGATAAACCC GGTAGGACAA AGCGGCGTGC CATTCGACAA GCACTATTCG GATCAGGCCA AGGCCTTCGT GAACGGCGAG TACCTGCCAC AGCGCTTCAG CGAGAAGGAT GTGGCGGAGC ATACGGAAGG GGTTCTGCGG CTGGTGCCGG GGGCGTAG
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Protein sequence | MKRSLFILAI IIALLAGGAG WYVNSKLPVR DGEIAMSRLQ APVTLRYDER GVPHIRAENE ADLYRALGYA HAQDRLFQME MLRRLARGEL AEVLGPNLLE TDKLFRSLRI REHADAYVAR QDKNTPTWKA LEAYIDGINQ YQDTHARPME FDALGIPRRR FTPEDTVSIA GYLAYSFAAA FRTEPLLTYV RDQLGPEYLK VFDLDWHPDG MLDSKPALAD ADWKGLNQLA QLSHKALEDA GLPQFEGSNA WVISGSRTQS GKPILAGDPH IRFSVPSVWY EAQLSAPGFE LYGHFPALNP FALLGHNMDF GWSLTMFQND DVDLIAEKTN PDNPNQVWYH GQWVDMKRTE QQIAVKGQAP VTLTLLESPH GPIVNNVMGK NAGQAPIAMW WSFLVSANPV LDGFYEANRA DTLDKMRSAA EKIQSPGLNI VWANAKGDIG WWAAAQLPIR PQGVNPTFIL DGSTAQADKL GFYPFSANPH EENPARGYIV SANFQPLSPT GMQIPGYYNP AERGQELNRQ LSDASVKWDL AASKALQLDT QTDYAPSILR PLIPVLRSVV SDPDELALVE RLASWKGDYP VDSVGATLFN QFLFDLTEET FHDELGDAMF ETLLSSRVMD AALPRLAADA DSPWWNNRNS PHEESRANTV KVAWRASVSH LRSLYGTNPD EWVWGKAHTL TQGHPLGSQK PLDMIFNVGP YAAPGTHEVP NNLSSSIRPA PWPVGYGPST RRLIDFADPA HSLGINPVGQ SGVPFDKHYS DQAKAFVNGE YLPQRFSEKD VAEHTEGVLR LVPGA
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