Gene Psyr_4777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4777 
Symbol 
ID3370327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5655560 
End bp5657971 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content56% 
IMG OID637655144 
Productglycoside hydrolase family 18 protein 
Protein accessionYP_237842 
Protein GI66048001 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.202282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.127676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACC CAAAAATCAT CACTCAATAC AAAAACAAGA AGGTCGACGC CGCATCGACC 
ATGACGGATA TATCAGGGAA AAATATCCTC ATGGGCTTCT GGCATAACTG GCCCTCGGAA
TCAGGTCAGG GCTACCAGCA GGGAATGTTT GCCGAAATGC CGCTGACAGG CATAGATAAG
GCCTACAACG TCATTGCAGT GGCTTTCATG AAAGGCGCCG GCATACCGAC CTTCAAGCCT
TATAACCTGA GTGATGAGGC GTTTCGCGCT CAGGTAGCGG AACTGAATGC CCAGGGCCGG
GCGGTGCTGA TCTCGCTTGG CGGGGCTGAT GCGCATATCG AGCTGCATGC CGGCCAGGAA
GAAGCGCTGG CCTACGAGAT TATCCGGCTG GTCGAAGTCT ATGGCTTTGA CGGCCTGGAT
ATCGATCTCG AACAGGCCGC CATTACCTTT GCCGATAACC GCACCGTATT ACCCGCCGCA
CTGAGAATGG TGCGCGAGCA TTACGAGACC GAAGGCAAGC ATTTCATTAT CAGCATGGCT
CCGGAGTTTC CTTATCTGCG ATCGGCTGCC CGCGATACGC CACTGCTGAA AGAAATCACC
ACCTACTTTC CGTTTCTGAA AGAAGCCGTC GCCTTCCTCA CGTCCTTCAG AAGTGGCGGC
GCGTACCTCG CTTATATCGA GGCGCTTGAG GACCTCTATG ACTTTATCGC CCCCCAATAC
TACAACCAGG GTGGCGACGG CATATGGGTC GACGAGCTCA ACCTGTGGGT GACGCAAAAC
AATGATGCCC ACAAGAAGGA ATTTCTCTAT TACCTGACCG ACAGCCTGAT CCACGGCACG
CGCGGCTTTA CCAAAATCCC GGCGAACCGG CTTGCGATCG GCTTGCCCAC CAATAATGAC
GCCGCCGCGA CAGGTTATGT GATCAACCCG GACGACGTGA AATACGCCCT GGACACCCTG
CAGGCCGACG GCAACCCGAT TCGCGGTCTG ATGACCTGGT CGGTCAACTG GGACAATGGC
ACGCCCAAGG TTGGCGAAGC CTATAAATGG GAGTTTGCCA AACGCTACGG TTATCTCACC
GGCGGCGAAA CGCCCGTACC TGACAAGCCT TCAGTACCCA CTGGCCTCAG GTCAACCGAA
CAAACCCCAA CGTCGGTGAA ACTCGTCTGG TCGCTGTCGG CAGGCCAGAA CCCGGTACTG
CGCTATGAAC TGCGCCGCGA CAACAGCGTG TCGTTATTTG CGGACAGCCC TTCGTATGAA
GACACCGGCC TTCAGTCCGG TATCACTTAC AGTTACCAGG TACGTGCCAT TGATGTCATG
GGCAACACCT CGGCATTCTC TCCAGCGATC AGCGTGAGTA CCCAGGCAGG AGGCGGCGGT
GCGGCGAACC CGACACCACC AGTCTTGAGC CTGGCAGGCG TCACCGATAG AAGTGTATCG
CTGGAATGGA CACAGTCCAG CAGCGAAGCT GGACTCCTCG AATATCAAAT TGCCCGGGAT
GGCTGGCCTT TTGTGAAGGT CCCTGCTGAC CAACCACGCG TCTATACCGA TGAGAACCTC
ACAGCGGGCA GAACGTATAC CTACTTCGTT ATTGCAAAAG ATATACAGGG TAAGTGGTCG
GAGATCAGCA ACGAGCTGGA AGTCCCAACC GATCTGGAAC CCTATAGACC TTCAGTGCCT
GTCGACTTCA GGTCAACCGG GCGGACCACC ACATCGATAA CGCTGGACTG GAGTGTTTCG
ACGGATGCCA GCGGTCCGTT TGACTATGAG CTGTTCCGCG AGGGTGTTTC GATAGGCAAG
GGCAAGGTTC CTCCCTTCAC CGACGAAGGC CTTCTGCAAA GCCGCCTTTA TGGTTATCAC
ATCATCGCGA CCGACAGTCT GGGCAACAGC TCAGGACTCT CTGAAGAACT TCTGGCCACT
ACAGAATCCG AGGCGTCCAA TGATCGACCT GCGCCACCCG GCAACTTGCG TCAGACAGGT
GCGACCCCCA CCAGTGTTTC ACTGGCATGG GATGCACCTA CCGGGGGTAC TGCCGTTGAC
GTCTACCATA TCTACAGTTT CGACGCGCCT ACTGTGACCG TCGACTCAAC CGTACTGACT
TATACCGTCA GAGGCCTGAC CCCAAGCAAG ACCTATCAGT ATCTGGTCGG CGCACGCGAT
AAAGATTCAG AACTGTCCGG GCCCAGCAAC ATTGTGCATG CCTCGACCAG CGCCGCATTG
CCTGAATGGA AAACAAATAC TGACTACGTG AAGGGGGATA AGGTGATGTA TGCCGGTGCC
TCTTACATCT GCCTCAATCC TCACCATTCA CAAACAGACT GGTACCCAGG CGGTGCGCCG
ACGCTATGGG CACCCTGGAC CGAGCAAGCA GGCGGCAGAG GTTTTCGCGA CTGGCCGAAA
GAATGGCAGT GA
 
Protein sequence
MLNPKIITQY KNKKVDAAST MTDISGKNIL MGFWHNWPSE SGQGYQQGMF AEMPLTGIDK 
AYNVIAVAFM KGAGIPTFKP YNLSDEAFRA QVAELNAQGR AVLISLGGAD AHIELHAGQE
EALAYEIIRL VEVYGFDGLD IDLEQAAITF ADNRTVLPAA LRMVREHYET EGKHFIISMA
PEFPYLRSAA RDTPLLKEIT TYFPFLKEAV AFLTSFRSGG AYLAYIEALE DLYDFIAPQY
YNQGGDGIWV DELNLWVTQN NDAHKKEFLY YLTDSLIHGT RGFTKIPANR LAIGLPTNND
AAATGYVINP DDVKYALDTL QADGNPIRGL MTWSVNWDNG TPKVGEAYKW EFAKRYGYLT
GGETPVPDKP SVPTGLRSTE QTPTSVKLVW SLSAGQNPVL RYELRRDNSV SLFADSPSYE
DTGLQSGITY SYQVRAIDVM GNTSAFSPAI SVSTQAGGGG AANPTPPVLS LAGVTDRSVS
LEWTQSSSEA GLLEYQIARD GWPFVKVPAD QPRVYTDENL TAGRTYTYFV IAKDIQGKWS
EISNELEVPT DLEPYRPSVP VDFRSTGRTT TSITLDWSVS TDASGPFDYE LFREGVSIGK
GKVPPFTDEG LLQSRLYGYH IIATDSLGNS SGLSEELLAT TESEASNDRP APPGNLRQTG
ATPTSVSLAW DAPTGGTAVD VYHIYSFDAP TVTVDSTVLT YTVRGLTPSK TYQYLVGARD
KDSELSGPSN IVHASTSAAL PEWKTNTDYV KGDKVMYAGA SYICLNPHHS QTDWYPGGAP
TLWAPWTEQA GGRGFRDWPK EWQ