| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4777 |
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| Symbol | |
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| ID | 3370327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5655560 |
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| End bp | 5657971 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637655144 |
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| Product | glycoside hydrolase family 18 protein |
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| Protein accession | YP_237842 |
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| Protein GI | 66048001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3469] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.202282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.127676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACC CAAAAATCAT CACTCAATAC AAAAACAAGA AGGTCGACGC CGCATCGACC
ATGACGGATA TATCAGGGAA AAATATCCTC ATGGGCTTCT GGCATAACTG GCCCTCGGAA
TCAGGTCAGG GCTACCAGCA GGGAATGTTT GCCGAAATGC CGCTGACAGG CATAGATAAG
GCCTACAACG TCATTGCAGT GGCTTTCATG AAAGGCGCCG GCATACCGAC CTTCAAGCCT
TATAACCTGA GTGATGAGGC GTTTCGCGCT CAGGTAGCGG AACTGAATGC CCAGGGCCGG
GCGGTGCTGA TCTCGCTTGG CGGGGCTGAT GCGCATATCG AGCTGCATGC CGGCCAGGAA
GAAGCGCTGG CCTACGAGAT TATCCGGCTG GTCGAAGTCT ATGGCTTTGA CGGCCTGGAT
ATCGATCTCG AACAGGCCGC CATTACCTTT GCCGATAACC GCACCGTATT ACCCGCCGCA
CTGAGAATGG TGCGCGAGCA TTACGAGACC GAAGGCAAGC ATTTCATTAT CAGCATGGCT
CCGGAGTTTC CTTATCTGCG ATCGGCTGCC CGCGATACGC CACTGCTGAA AGAAATCACC
ACCTACTTTC CGTTTCTGAA AGAAGCCGTC GCCTTCCTCA CGTCCTTCAG AAGTGGCGGC
GCGTACCTCG CTTATATCGA GGCGCTTGAG GACCTCTATG ACTTTATCGC CCCCCAATAC
TACAACCAGG GTGGCGACGG CATATGGGTC GACGAGCTCA ACCTGTGGGT GACGCAAAAC
AATGATGCCC ACAAGAAGGA ATTTCTCTAT TACCTGACCG ACAGCCTGAT CCACGGCACG
CGCGGCTTTA CCAAAATCCC GGCGAACCGG CTTGCGATCG GCTTGCCCAC CAATAATGAC
GCCGCCGCGA CAGGTTATGT GATCAACCCG GACGACGTGA AATACGCCCT GGACACCCTG
CAGGCCGACG GCAACCCGAT TCGCGGTCTG ATGACCTGGT CGGTCAACTG GGACAATGGC
ACGCCCAAGG TTGGCGAAGC CTATAAATGG GAGTTTGCCA AACGCTACGG TTATCTCACC
GGCGGCGAAA CGCCCGTACC TGACAAGCCT TCAGTACCCA CTGGCCTCAG GTCAACCGAA
CAAACCCCAA CGTCGGTGAA ACTCGTCTGG TCGCTGTCGG CAGGCCAGAA CCCGGTACTG
CGCTATGAAC TGCGCCGCGA CAACAGCGTG TCGTTATTTG CGGACAGCCC TTCGTATGAA
GACACCGGCC TTCAGTCCGG TATCACTTAC AGTTACCAGG TACGTGCCAT TGATGTCATG
GGCAACACCT CGGCATTCTC TCCAGCGATC AGCGTGAGTA CCCAGGCAGG AGGCGGCGGT
GCGGCGAACC CGACACCACC AGTCTTGAGC CTGGCAGGCG TCACCGATAG AAGTGTATCG
CTGGAATGGA CACAGTCCAG CAGCGAAGCT GGACTCCTCG AATATCAAAT TGCCCGGGAT
GGCTGGCCTT TTGTGAAGGT CCCTGCTGAC CAACCACGCG TCTATACCGA TGAGAACCTC
ACAGCGGGCA GAACGTATAC CTACTTCGTT ATTGCAAAAG ATATACAGGG TAAGTGGTCG
GAGATCAGCA ACGAGCTGGA AGTCCCAACC GATCTGGAAC CCTATAGACC TTCAGTGCCT
GTCGACTTCA GGTCAACCGG GCGGACCACC ACATCGATAA CGCTGGACTG GAGTGTTTCG
ACGGATGCCA GCGGTCCGTT TGACTATGAG CTGTTCCGCG AGGGTGTTTC GATAGGCAAG
GGCAAGGTTC CTCCCTTCAC CGACGAAGGC CTTCTGCAAA GCCGCCTTTA TGGTTATCAC
ATCATCGCGA CCGACAGTCT GGGCAACAGC TCAGGACTCT CTGAAGAACT TCTGGCCACT
ACAGAATCCG AGGCGTCCAA TGATCGACCT GCGCCACCCG GCAACTTGCG TCAGACAGGT
GCGACCCCCA CCAGTGTTTC ACTGGCATGG GATGCACCTA CCGGGGGTAC TGCCGTTGAC
GTCTACCATA TCTACAGTTT CGACGCGCCT ACTGTGACCG TCGACTCAAC CGTACTGACT
TATACCGTCA GAGGCCTGAC CCCAAGCAAG ACCTATCAGT ATCTGGTCGG CGCACGCGAT
AAAGATTCAG AACTGTCCGG GCCCAGCAAC ATTGTGCATG CCTCGACCAG CGCCGCATTG
CCTGAATGGA AAACAAATAC TGACTACGTG AAGGGGGATA AGGTGATGTA TGCCGGTGCC
TCTTACATCT GCCTCAATCC TCACCATTCA CAAACAGACT GGTACCCAGG CGGTGCGCCG
ACGCTATGGG CACCCTGGAC CGAGCAAGCA GGCGGCAGAG GTTTTCGCGA CTGGCCGAAA
GAATGGCAGT GA
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| Protein sequence | MLNPKIITQY KNKKVDAAST MTDISGKNIL MGFWHNWPSE SGQGYQQGMF AEMPLTGIDK
AYNVIAVAFM KGAGIPTFKP YNLSDEAFRA QVAELNAQGR AVLISLGGAD AHIELHAGQE
EALAYEIIRL VEVYGFDGLD IDLEQAAITF ADNRTVLPAA LRMVREHYET EGKHFIISMA
PEFPYLRSAA RDTPLLKEIT TYFPFLKEAV AFLTSFRSGG AYLAYIEALE DLYDFIAPQY
YNQGGDGIWV DELNLWVTQN NDAHKKEFLY YLTDSLIHGT RGFTKIPANR LAIGLPTNND
AAATGYVINP DDVKYALDTL QADGNPIRGL MTWSVNWDNG TPKVGEAYKW EFAKRYGYLT
GGETPVPDKP SVPTGLRSTE QTPTSVKLVW SLSAGQNPVL RYELRRDNSV SLFADSPSYE
DTGLQSGITY SYQVRAIDVM GNTSAFSPAI SVSTQAGGGG AANPTPPVLS LAGVTDRSVS
LEWTQSSSEA GLLEYQIARD GWPFVKVPAD QPRVYTDENL TAGRTYTYFV IAKDIQGKWS
EISNELEVPT DLEPYRPSVP VDFRSTGRTT TSITLDWSVS TDASGPFDYE LFREGVSIGK
GKVPPFTDEG LLQSRLYGYH IIATDSLGNS SGLSEELLAT TESEASNDRP APPGNLRQTG
ATPTSVSLAW DAPTGGTAVD VYHIYSFDAP TVTVDSTVLT YTVRGLTPSK TYQYLVGARD
KDSELSGPSN IVHASTSAAL PEWKTNTDYV KGDKVMYAGA SYICLNPHHS QTDWYPGGAP
TLWAPWTEQA GGRGFRDWPK EWQ
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