| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4678 |
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| Symbol | |
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| ID | 3370228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5544893 |
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| End bp | 5546191 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655045 |
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| Product | GGDEF |
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| Protein accession | YP_237743 |
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| Protein GI | 66047902 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGCGTC CATCAGCTGC ACGCTTGAGT CATTTTCTGC CTTCACTGGG TTTGCTGGTG
GCGGGGCTCG CGGCTGCGTA CGTAAAGGAC CTGAACGTCT TCTTCACCTC TCTGTTCAAC
GTGCTTCCTA CTCTGGTTCT TCTGTTGGGC GGTGCGTATT GCTGTGTTTA TCGACGTCAG
CGCGAGCTGT TTCTGATGCT CACGGTGTAT ATCGCCTACT ACCTGCTCGA CACCCAGACC
GATTACTACC GTGACCACGG CAAGGTCCGC GAGGATGCGG CGGTGATCTT TCACCTGGTC
TGCCTGCTGC TGCCGCTGCT GTTCGGGCTT TATGCAGCAT GGGAGGAACG CACGCATCTG
TTCCAGGACA TGATTGCGCG GCTCGCGGTG CTGGTGGCGC TGGGCGGTGT GGCGGTGGGG
CTTGAGCAAA GTTATCCGGT CGAGCTGCAA GTCTGGCTGG CCGACATCCG CTGGCCTGTC
CTGCATGGCG CATGGATGAG CCTGATTCAG TTGTCCTATG CGATGTTTCT GGTGTCGTTC
GGGGTGCTGA TCTGGCAATA CCTGGAAAAG CCGCGACCGC TGCATGCGGC GCAGATCGTC
GGCCTGCTGG GTTTGCTCTG GGCATTGCCC AAGACCTTCA TTCTGCCGTT CACACTGAAC
ATCCTTTGCA GCCAGGTGAT GCTGATGATT GCCGCTGCCG TCGCTCACGA GGCTTATCAG
ATGGCCTTCC GCGACGAGCT TACCGGGCTG CCTGGGCGTC GGGCGCTCAA TGAGCGCATG
CAGCGTCTGG GTCGCAACTA TGTGCTGGCG ATGAGCGACG TGGATCACTT CAAGAAATTC
AATGACACCC ACGGCCACGA TGTGGGCGAT CAGGTGCTGC GTCTGGTGGC CAGCAAGCTG
TCGAAAATCA CCAATGGTGG CGGCAAGGCC TATCGCTATG GCGGTGAGGA GTTCGCCATT
GTGTTCGCCG CCAAGAGCAT CGATGAGTGC ATGCCGCACC TGGAAGCCAT CCGCGAGACC
ATCGCCAGTT ACGAAATTCA GCTGCGCAAC AAGGACAATC GCCCTCAGGA CGACCAGCAA
GGCCGACAGC GTCGAAGCGG CGCGCAGGCT GGCAGCGTGT CGGTGACGGT GAGTATCGGC
GTTGCCGAAC GCCAGCCGGA GCATCGCACG CCCGAAGAAG TGCTCAAAAG CGCCGACCAG
GCGCTGTATG CAGCCAAGGG CGCCGGGCGC AATTGTGTGG TGGCTTACGG GCAGTTGAAC
CGACGCGGCG CTGTGCGCAC GACTGAAGCG GCAACCTGA
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| Protein sequence | MLRPSAARLS HFLPSLGLLV AGLAAAYVKD LNVFFTSLFN VLPTLVLLLG GAYCCVYRRQ
RELFLMLTVY IAYYLLDTQT DYYRDHGKVR EDAAVIFHLV CLLLPLLFGL YAAWEERTHL
FQDMIARLAV LVALGGVAVG LEQSYPVELQ VWLADIRWPV LHGAWMSLIQ LSYAMFLVSF
GVLIWQYLEK PRPLHAAQIV GLLGLLWALP KTFILPFTLN ILCSQVMLMI AAAVAHEAYQ
MAFRDELTGL PGRRALNERM QRLGRNYVLA MSDVDHFKKF NDTHGHDVGD QVLRLVASKL
SKITNGGGKA YRYGGEEFAI VFAAKSIDEC MPHLEAIRET IASYEIQLRN KDNRPQDDQQ
GRQRRSGAQA GSVSVTVSIG VAERQPEHRT PEEVLKSADQ ALYAAKGAGR NCVVAYGQLN
RRGAVRTTEA AT
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