Gene Psyr_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4620 
Symbol 
ID3370169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5478853 
End bp5479857 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID637654989 
Producthypothetical protein 
Protein accessionYP_237688 
Protein GI66047847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.47943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.677055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACA CCTTTCGCGC AACGTTTCCT GCATTGTTTC TGTCATTGAT ACTGCCTTGC 
GCCTTGCCTG CCCTCGCAGC CGACCCGGCG CCAGCCCCGG CCAAGGACGC TGCTGCAGAA
GCGCCCGTCG AAAGAGCCCC ACTGCTCAGC CGCTCGCAGG AAGACGCAAT AGCGCTGGAA
CGTCAATTGC CGCGCGAAGA TCAGCAACAA CTTCAGGCTG GAGACGACAG CTTTCTCGCG
CTCTGGAAAC CCGCCAACAC TGAGGCCCCT GAAGGCGCAG TCATCATTGT GCCTGGCGAC
GCCGAGTCAC CGGACTGGCC CGACGCTGTC GGCCCGCTGC GACGCAAGTT TCCGGATGTC
GGCTGGTCGA GCCTGAGCAT CACCCTGCCG GACCCGCTCG ACAATACGCC GGGAGCACGC
GAGCCCGATG CTGCTCCAGC AGATGCAAAC ACCGCCAAAG CCACTGACGC ACCGAAGGAA
CCCCCCAAGG ACGCCACCGC GACGGCAAAA GACCCGGCCG CAGAAGCCGA GGCACTGGCT
GCGGCTGAAA CGGCCAAGGC TGCTGCCGAC GAAGCGCTCG ACAAGGCTCA GGCCGAGCGC
ATCTTCGCGC GGATCGAAAG CGCGATCAGC TTTGCGCAGC AGAACAAGGC ACGCAGTATC
GTGTTGATCG GCCACAGCAG CGGCGCGTAC TGGGCGGCCA GGTTCCTCAA TGAGCGGACA
TCGCCTGTGG TGCAGAAACT GGTGATGCTG GCGGCGCGTG AGCCTATGAA TGCCAAGCCT
TCGCTGTTGG ACATGGTGCC TCAGCTGAAA GTAAAGGCCG TCGACTTCAT CTACAAAAAC
TCACCTGACG AGGCCGCAAA GGCCCGCCTG CAGGCCAGTA AACGCACCAA GGGGCCAGGC
TTTACCCAGA TCGGCCTGAT CAACATCGCC GGCAGCGGAG ATACCGAACA AGAGCAGCTA
TTCCGCCGTG TTCGCGGCTG GATAGACGCC AAAGAGGAAA AATAA
 
Protein sequence
MSYTFRATFP ALFLSLILPC ALPALAADPA PAPAKDAAAE APVERAPLLS RSQEDAIALE 
RQLPREDQQQ LQAGDDSFLA LWKPANTEAP EGAVIIVPGD AESPDWPDAV GPLRRKFPDV
GWSSLSITLP DPLDNTPGAR EPDAAPADAN TAKATDAPKE PPKDATATAK DPAAEAEALA
AAETAKAAAD EALDKAQAER IFARIESAIS FAQQNKARSI VLIGHSSGAY WAARFLNERT
SPVVQKLVML AAREPMNAKP SLLDMVPQLK VKAVDFIYKN SPDEAAKARL QASKRTKGPG
FTQIGLINIA GSGDTEQEQL FRRVRGWIDA KEEK