| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4606 |
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| Symbol | |
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| ID | 3370155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5462253 |
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| End bp | 5464175 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637654975 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_237674 |
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| Protein GI | 66047833 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.310199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA CATCGAGGCG CTGGCCCTTC GCGGCCTGCC TGTTATCGCT TGCCTGCGGC
ACCGCTGCTG CCGCGCCCTA TTCGACCATG GTGGTGTTCG GCGACAGCCT GGCCGATGCC
GGGCAGTTTC CCGACACCGC CGGGCCCAGG GGCTCTACGC TTCGGTTCAC CAATCGGGTC
GGCCCCACTT ATCAGGACGG CAGTGGAGAG GTGTTCAATC TGAACTCGTC GACGCTGATC
GGCAGGATGC TCGGTGTGCC GGCAGGAGAT CTGGCGGCTT CCACGTCGCC GGTCAATGCT
GCGCTGGGCG CACCCGATGG CAATAACTGG GCAGTCGGCG GCTATCGGAC CGACCAGATT
CTTGACTCGA TCAACTCGCA ATCCACCGTC GTCGACCCGA ACACCGGCAC ATTGCTGCGC
AGCCGGACCG GTTATCTGCC CGCCAACGGT TTTCGCGCCG ACCCCAACGC GCTTTATTAC
CTGACCGGAG GCGGCAACGA CTTCCTGCAG GGTCGTGTGT TGAGTGCCAG CAGCGCCGCG
CAAGCTGCCA ATCAGCTGGC TGACAGCGCG CAAGCCCTGC AACAGGCCGG TGCGCGCTAC
ATCATGGTCT GGTTGCTGCC GGATATCGGT AAAACGCCAG CCTTGAGCGG TTCGCCACTG
GCTTCGGCAA CTTCCGCACT CAGCGCGGGC TTCAATCAGC AGTTAGTCAG CCGACTGGCG
CAGATCAATG CCCAGATCAT TCCGCTGAAT GTTCCATTGC TGATCAATGA AGTCCTCGCC
GAACCGGCAC GCTTCGGGTT CGATCCCAAC GAGAATCTGG TCAGTACCTG TTTCAGCGGC
AATAGCTGCC GGGAAAGCAC CACCAACGGC CGGTCCAGTG CGACGCCGAA TCCGAACCGG
CTGTTCTTCA ACGATCGCGT GCATCCGACC GAGGCCGGGC AGAGGTTGCT GGCCGACTAC
GCCTACTCGC TGCTTTCGGC CCCCTGGGAA ATCTCCCTGC TGCCGGAAAT GGCCAATGGC
ACGCTGCGCA TGCATCAGGA CGAGATCCGC GCCCAGTGGC TCAGCGACTG GGGCAACTGG
CAAGGCATAG GACAGTGGCA GAGCATGCTT TCGGCAGGCG GTCAGAAAAT GGACTTCGAC
GCGCAGGACA GTTCGGCTGA TGCTGACGGA AGAGGCTATA ACCTGACCAT CGGCGGCAGC
TACCGATTTG CCGAAAACTG GCGCACTGGG GTTGTCGCCG GGGCGTATCG CCAGAGTCTC
GAGGCAGGGC CAAGGGATTC GGACTACAAA CTCAACAGCT ACATCGCCAC TGCGTTCCTG
CAGTATCAGG CCAACCACTG GTGGGGTGAT CTGGCGGTGT CGGGCGGCAA ACTGGACTAC
GAAAATGCCG AGCGCAAGTT CGCGCTGGGC GTCAGCGAAG GTCAGGAAAA AGGCGATACC
GACGGCGAAA TGTGGGCTGT CAGCGGGCGG GTCGGTTTCG ACATCGCGGG CCCGACCAGT
CGCTGGCATC TGTCGCCTTT CGTCAGCGCC GATTACGCGC ACATCAATGT CGACGGCTAC
TCGGAAAAAG GCGACCGCTC GACCGCGCTG ACCTTCAGTG ACCAGACGCG CAAATCGCGG
CGTGCAGGCG TGGGTGTGCA GGGCAAATTC CAGGTGACAC CGAGCACACA GGTATGGGGC
GAAGTGGCCC ATGAAAGGGA GTTCGAGACC GATCAGCAGG ACGTGACCAT GGCGCTCAAC
AGCGTTCAGT CGGTCGGTTT CACGCTGCAA GGCTACACAC CGCAACGCGA CCTGAACCGG
GCCACGCTGG GCGTCAGCCA GAAGCTGACT CAGGACCTGA CACTGCGCGG CAATTACAAC
TGGCGCAAGA ACGACGACGT GACCCAGCAA GGGGTGAATG TCGCGTTGAG TCTGAGTTTC
TAG
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| Protein sequence | MTKTSRRWPF AACLLSLACG TAAAAPYSTM VVFGDSLADA GQFPDTAGPR GSTLRFTNRV
GPTYQDGSGE VFNLNSSTLI GRMLGVPAGD LAASTSPVNA ALGAPDGNNW AVGGYRTDQI
LDSINSQSTV VDPNTGTLLR SRTGYLPANG FRADPNALYY LTGGGNDFLQ GRVLSASSAA
QAANQLADSA QALQQAGARY IMVWLLPDIG KTPALSGSPL ASATSALSAG FNQQLVSRLA
QINAQIIPLN VPLLINEVLA EPARFGFDPN ENLVSTCFSG NSCRESTTNG RSSATPNPNR
LFFNDRVHPT EAGQRLLADY AYSLLSAPWE ISLLPEMANG TLRMHQDEIR AQWLSDWGNW
QGIGQWQSML SAGGQKMDFD AQDSSADADG RGYNLTIGGS YRFAENWRTG VVAGAYRQSL
EAGPRDSDYK LNSYIATAFL QYQANHWWGD LAVSGGKLDY ENAERKFALG VSEGQEKGDT
DGEMWAVSGR VGFDIAGPTS RWHLSPFVSA DYAHINVDGY SEKGDRSTAL TFSDQTRKSR
RAGVGVQGKF QVTPSTQVWG EVAHEREFET DQQDVTMALN SVQSVGFTLQ GYTPQRDLNR
ATLGVSQKLT QDLTLRGNYN WRKNDDVTQQ GVNVALSLSF
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