Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4373 |
Symbol | |
ID | 3369913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5227798 |
End bp | 5230521 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654733 |
Product | PAS |
Protein accession | YP_237441 |
Protein GI | 66047600 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.323082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.21328 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCAGC CCTTGCCGGT ATCGAGCGAG CCCGGTCCGA TCGGGGCGGA CCTCTATCTG CTGCTGGATG ACGAAGGCCG CATACAAAGC ATCAGCCCGC ACTTGCTCTC TCGTCTGGAC ATCGCTGCGC CAGTGCCGGC TGCCCAGCGA CTGATGAGCC TGCTGCTGCC CAACAGCGCG CTGGTTATCG AAGGTGTGCC GCGTGACTGG CTGGGGCACA TGCTCGACCT GGACTTCAAG GGCGACGATG CACACACCTT GCACGCCCGA GGCTGGGTGC AGGCGCATGG CAAGGGCTGG CTCTTGCAAT TGCTGGATAT CAGCGACCTG ATGGAGGAAG CCAGTGCCGC GCGCAGCCGC CAGCAGTGCC TGCGGTTTGC CGGGCAGATG GCCGAGCGTG TGCGAGGGTG CAATGTCGAC CGCCTGACTG CCGTGGTGAG CGAGCAGCTT GAGGAACTCG CGCAGCTGTG GCGCATTCCC TGTGTGGCGC TGGTGTTGCC GGAAGTTGGC GGTGTCGGCT GGCGTGTTTA TTGTCAGTAC AGCGCTCATA CGGCGCCCGA GTTGTGGCAG GTCGGGCAGC GGCTGGGCAC TGCGCTGGAT CGATTCAACG TCGATGCCAC GCAGCAGCTG AGGTTTGGCG GCAGTGTCGA TGCGGGGGCG CTGCAAAGTA TTTTCGGCAA CGCTGACGGT TTTCTCATCC CTCACAGCCG CGATAACGTT GCCAAGGCCT GGCTGATGTT CGGATTTTAT AACGCGCAGC AGCAGGCGCC GGACCTTGGC GAGCGCGAGT GGCTTAACCT CGGCTCAGCC TTGGCCGGGC CGGTGCTTTT TCGAATGTCC GAGCAACATA ACCGTCACCA TGTCGAGCGC CTGGCGGTGC TTCAGGACCT GCTGGGCACC GGGTGGTGGG AATTGCTGCC GGATCGTGAC GAGGTTCTGC TGGCACCGCA GCTGGCTCGC AGTCTGCGTC TGGGCGACCG GGTCGAGAGC CTGTCGCGTC AGGACTGGCT GGCACTGATT CATCCCGCCG ATCGACAGGA GCTGTCCAGT CGCCTCGCCC AGTTGCGCGA CAAGGGCACG CCGCTGTTGC TCTGTGTACG TCTGGCACAA ACCGACCCCG CTCAGGAAAC CCTCTGGTTT CGTATTCAGG GGCAGGCGTT GCACAGGGGG CAGGTGCAGC GGGTATTGGG CTTCATGCTG GACGTCAGCG ATATCAAGAA TCAGGAAACC GAGGCCGCCG CCGCCCATGC CCGGCTGGAT AACCTGATTG CCAGTTCGCC CGCCGTGATT TACGTGCAGC GTTATGATCA CGGCAATCTG GAACCCACCT TTTTCAGTGA CAGCCTCACG CCTTTGCTGG GCTGGACGCT GGCCGATTGC GTCGACGGGC AACTGGCGGG GTACATCCAT CCCGACGACC ACGACATCTG GTTCGAGCGT AATCGCCAAC TGCTGCGCGA AGGATTCGTC AGCCGCCGTT TCAGGTTGCG CAACAGGAAC GGCCAATACC ACTGGCTGCT GGACGAGGCG CGACTGCTGC GTGACGACCT CGGCATGCCG GTGGAGGCGG TGGGTCTGTG GCTGGATGTG ACCGAGGCCA CCCTGGCCGC CGAGCATATA CGGCGTAGCG AGGAGCGTTA CCGCATTCTG GTCGAGGATT CGCCGGCCAT GATCTGCCGC TACACGCCGG ACCTGGTGTT GAGTTTCGGC AACCGGCCGC TGGCCAAGTA TATGGAGTGC ACACCCGAGC AACTGACCGG GATCAACCTG GGAGACTGGC TGTCGGACGA GCAGCGCGAG GCATTCATCA AGCGTATCGG CCAGCTGACT CCGGAAGCGC CGGTGAGTAC CGAAGAAATC TGTATCGAGC TGCCGGGACG CGAGTATGCC TGGTGGATAT GGGCCGACCG GGGGGTATTC GATGAACACG GCAAACTGGT CGAAGTGCAG GCGGTGGGCC GTGACAACAC CGATGTACGC CGCTCGCGCA TGCAGTTGAA TCAGAGCGCG AAGATGGCAA CGCTTGGCGA GATGTCCACC GGTCTGGCCC ACGAGATCAA TCAGCCGCTC AACGTCATGC GCATGGCCGT GGTCAACGTC CTCAAGCGTC TGGGTCGGGG TGATGTGGAC ATCGAATACC TCACTGAAAA GCTCAATCGC ATCGACACCC AGGTGCAGCG CGCCGCCCGG GTGGTCGATC ATATGCGGGT ATTCGGTCGC CGCTCTGAAG TAGAAGAGCA GCTGTTCGAT CCGGCCCAGG CGGTCGAAGG CACGATCTCG ATGCTGGCTG AAGGCATGAA AGGCAAGGGC GTGCAGCTGC GGGTCGGCGG GATGATCGAC GCGGTGCGGG TTCGTGGTCA TGTCGATCAG CTTGAGCAGG TGCTGATCAA CCTGATGGTC AACGCCCGGG ATGCCTTGTT GTCGCGCCGG GAAAAGGACC GGGATTTCGA GCCATGGATC AGTGTCGAGG CCGAGCGCGA TGAAAATATC ATCCGCCTGG CGGTCCAGGA CAACGGTGGA GGCATTGATC CGCGGTTGCT GGAGCGCATT TTCGAGCCGT TTTTCACCAC TAAACCGGTA GGTGTCGGCA CCGGGCTGGG CTTGTCCGTC AGTTACGGCA TCGTCGACCA GATGGGCGGC CAGCTCAGCG TCGCCAACAT CGGCGAGGGC GCTCGCTTCC AGATCGAGCT GCCGATATTC AACGCCGATC AGCCCGGCAG CTAA
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Protein sequence | MPQPLPVSSE PGPIGADLYL LLDDEGRIQS ISPHLLSRLD IAAPVPAAQR LMSLLLPNSA LVIEGVPRDW LGHMLDLDFK GDDAHTLHAR GWVQAHGKGW LLQLLDISDL MEEASAARSR QQCLRFAGQM AERVRGCNVD RLTAVVSEQL EELAQLWRIP CVALVLPEVG GVGWRVYCQY SAHTAPELWQ VGQRLGTALD RFNVDATQQL RFGGSVDAGA LQSIFGNADG FLIPHSRDNV AKAWLMFGFY NAQQQAPDLG EREWLNLGSA LAGPVLFRMS EQHNRHHVER LAVLQDLLGT GWWELLPDRD EVLLAPQLAR SLRLGDRVES LSRQDWLALI HPADRQELSS RLAQLRDKGT PLLLCVRLAQ TDPAQETLWF RIQGQALHRG QVQRVLGFML DVSDIKNQET EAAAAHARLD NLIASSPAVI YVQRYDHGNL EPTFFSDSLT PLLGWTLADC VDGQLAGYIH PDDHDIWFER NRQLLREGFV SRRFRLRNRN GQYHWLLDEA RLLRDDLGMP VEAVGLWLDV TEATLAAEHI RRSEERYRIL VEDSPAMICR YTPDLVLSFG NRPLAKYMEC TPEQLTGINL GDWLSDEQRE AFIKRIGQLT PEAPVSTEEI CIELPGREYA WWIWADRGVF DEHGKLVEVQ AVGRDNTDVR RSRMQLNQSA KMATLGEMST GLAHEINQPL NVMRMAVVNV LKRLGRGDVD IEYLTEKLNR IDTQVQRAAR VVDHMRVFGR RSEVEEQLFD PAQAVEGTIS MLAEGMKGKG VQLRVGGMID AVRVRGHVDQ LEQVLINLMV NARDALLSRR EKDRDFEPWI SVEAERDENI IRLAVQDNGG GIDPRLLERI FEPFFTTKPV GVGTGLGLSV SYGIVDQMGG QLSVANIGEG ARFQIELPIF NADQPGS
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