| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4341 |
|---|
| Symbol | thiE |
|---|
| ID | 3369881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 5194772 |
|---|
| End bp | 5195389 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637654701 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_237409 |
|---|
| Protein GI | 66047568 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC GTGGCCTGTA TGCCATCACC GACAGCCAGT TGCTGTCCGG AAAATTTCTG
TCGTACGTCG AAGCGGCGCT GGACGGCGGC GTGACGCTGC TGCAATACCG CGACAAGAAC
AGTGACGAGT CCCGCCGCCT GCGCGAAGCG ACCGAACTGC TCAAGCTCTG CGAACGCTAC
AAGACCCGGC TGATCATCAA CGATGACGCT GAACTGGCTG CGCGGCTGGG GGTGGGCGTG
CATTTGGGAC AGTCCGACGG CTCGCTGCCC GATGCCCGCG CCCTGCTCGG GCACAAGGCG
ATTGTCGGGG CTACTTGTCA TGGCCGCGTG GAATTGGCCG AGCAAGCCAA GGCTGACGGC
GCGACGTACG TGGCATTTGG CAGGTTCTTC AACTCCCTGA CCAAACCCGG CGCCCCGGCC
GTGCCGCTGG ACCTGATCGC TCAGGTGCGT GCCAGGGTCC ACCTGCCGAT TGCGGTGATT
GGCGGCATTA CCCTGGAGAA CGCACCGCAA CTGGTCGAAC ACGGGGCCGA CCTGCTCGCC
GTGGTGCACG GCCTGTTCGG CGCTGAAAAT ACTCAGGAAG TGACGCGCCG GGCGAAAGCT
TTCACGGCGT TGTTGTAG
|
|---|
| Protein sequence | MKLRGLYAIT DSQLLSGKFL SYVEAALDGG VTLLQYRDKN SDESRRLREA TELLKLCERY
KTRLIINDDA ELAARLGVGV HLGQSDGSLP DARALLGHKA IVGATCHGRV ELAEQAKADG
ATYVAFGRFF NSLTKPGAPA VPLDLIAQVR ARVHLPIAVI GGITLENAPQ LVEHGADLLA
VVHGLFGAEN TQEVTRRAKA FTALL
|
|---|
| |