Gene Psyr_4318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4318 
Symbol 
ID3369858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5168966 
End bp5169964 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content49% 
IMG OID637654678 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_237386 
Protein GI66047545 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCTA ATATGTTTTC AAAAATCCCC TTAACGTCTC TACGATCGTT CGAGTCAGCG 
GCTCGACTAA GCAGCTTCAA AGCGGCTGCC ATTGAACTTT TTGTTACTCC TTCAGCGATT
TCACATCAAG TAAAATCACT AGAACACTGG CTCGGCTTAT TGCTTTTTGA GCGAGTAGCC
AAGGGAGTCA CCCTAACGAC TGAAGGGCTT GATTTATACA AGAATATCCA TCAGCATTTT
TCAAGCATAA ACCAAAGTCT TAGTCAACTA CGCTCACAGA CCGACGAGAA CGCAATCACC
GTCACAACCA CCCATGCATT TGCCTCATTG TGGCTCATTC CCAGATTAGG AGATTTCTAC
CGCCGCCATC CAACGATGCA AGTCAACATC ATCACCAGCA AAACACAGGC AGACCTGCAC
AGAGATGCCA GTATCGACGT GGCTATTAGC AGCGTTTTCA AAGAGGTCCC TGATACCTAT
CAGCTACATC TAATGGACGA AAGCTTTCTG GCCTATATGC CCTGCAGGAC GCCCTTATCT
GGAGACACAA GGTCCCCACT CATCAACGTT CGTTGGGAGG CTGATGGCCA TAACCCATTC
GACTGGACGA CTTGGTGCCA AGCGGCGGGA CACGACGATT GGCTGGCCAA CGCCACGTTC
AGGGAGTACG ACGATGAACA TCATGCTTTG CAAGCTGCAA CTTCTGGCTA TGGGATGGTG
CTCGCCAGCG ACGTCTTAGC CGTCGACAGT GTTACCCGAG GCTTTTTAAC GCCATACAAG
CCCGAGGTTA AACTAACGGG GACCCATTAT ATCTCGGCCT GTGTACCTGG CAGAGAACGA
AATCCGCCCG TCAGGTACTT CCTTGACTGG CTCAGTAAAG AAGCCTCTAA ACATCTTGTA
CTGCAACGCC TCCTCACAGA GTCCATAGAC TTTAGCGCAC ACAAAAATCC ATTGAGGAAC
GACCGGAATC AAAGCATGCT CAAGCTCCAG ATATACTAA
 
Protein sequence
MLANMFSKIP LTSLRSFESA ARLSSFKAAA IELFVTPSAI SHQVKSLEHW LGLLLFERVA 
KGVTLTTEGL DLYKNIHQHF SSINQSLSQL RSQTDENAIT VTTTHAFASL WLIPRLGDFY
RRHPTMQVNI ITSKTQADLH RDASIDVAIS SVFKEVPDTY QLHLMDESFL AYMPCRTPLS
GDTRSPLINV RWEADGHNPF DWTTWCQAAG HDDWLANATF REYDDEHHAL QAATSGYGMV
LASDVLAVDS VTRGFLTPYK PEVKLTGTHY ISACVPGRER NPPVRYFLDW LSKEASKHLV
LQRLLTESID FSAHKNPLRN DRNQSMLKLQ IY