Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4318 |
Symbol | |
ID | 3369858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5168966 |
End bp | 5169964 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637654678 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_237386 |
Protein GI | 66047545 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCTA ATATGTTTTC AAAAATCCCC TTAACGTCTC TACGATCGTT CGAGTCAGCG GCTCGACTAA GCAGCTTCAA AGCGGCTGCC ATTGAACTTT TTGTTACTCC TTCAGCGATT TCACATCAAG TAAAATCACT AGAACACTGG CTCGGCTTAT TGCTTTTTGA GCGAGTAGCC AAGGGAGTCA CCCTAACGAC TGAAGGGCTT GATTTATACA AGAATATCCA TCAGCATTTT TCAAGCATAA ACCAAAGTCT TAGTCAACTA CGCTCACAGA CCGACGAGAA CGCAATCACC GTCACAACCA CCCATGCATT TGCCTCATTG TGGCTCATTC CCAGATTAGG AGATTTCTAC CGCCGCCATC CAACGATGCA AGTCAACATC ATCACCAGCA AAACACAGGC AGACCTGCAC AGAGATGCCA GTATCGACGT GGCTATTAGC AGCGTTTTCA AAGAGGTCCC TGATACCTAT CAGCTACATC TAATGGACGA AAGCTTTCTG GCCTATATGC CCTGCAGGAC GCCCTTATCT GGAGACACAA GGTCCCCACT CATCAACGTT CGTTGGGAGG CTGATGGCCA TAACCCATTC GACTGGACGA CTTGGTGCCA AGCGGCGGGA CACGACGATT GGCTGGCCAA CGCCACGTTC AGGGAGTACG ACGATGAACA TCATGCTTTG CAAGCTGCAA CTTCTGGCTA TGGGATGGTG CTCGCCAGCG ACGTCTTAGC CGTCGACAGT GTTACCCGAG GCTTTTTAAC GCCATACAAG CCCGAGGTTA AACTAACGGG GACCCATTAT ATCTCGGCCT GTGTACCTGG CAGAGAACGA AATCCGCCCG TCAGGTACTT CCTTGACTGG CTCAGTAAAG AAGCCTCTAA ACATCTTGTA CTGCAACGCC TCCTCACAGA GTCCATAGAC TTTAGCGCAC ACAAAAATCC ATTGAGGAAC GACCGGAATC AAAGCATGCT CAAGCTCCAG ATATACTAA
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Protein sequence | MLANMFSKIP LTSLRSFESA ARLSSFKAAA IELFVTPSAI SHQVKSLEHW LGLLLFERVA KGVTLTTEGL DLYKNIHQHF SSINQSLSQL RSQTDENAIT VTTTHAFASL WLIPRLGDFY RRHPTMQVNI ITSKTQADLH RDASIDVAIS SVFKEVPDTY QLHLMDESFL AYMPCRTPLS GDTRSPLINV RWEADGHNPF DWTTWCQAAG HDDWLANATF REYDDEHHAL QAATSGYGMV LASDVLAVDS VTRGFLTPYK PEVKLTGTHY ISACVPGRER NPPVRYFLDW LSKEASKHLV LQRLLTESID FSAHKNPLRN DRNQSMLKLQ IY
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