Gene Psyr_4294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4294 
Symbol 
ID3369834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5120635 
End bp5121204 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID637654654 
Producthistone deacetylase family protein 
Protein accessionYP_237362 
Protein GI66047521 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGA TACTCAAGCT TGATAGCGCC CGACTGCTGA TGCGGCAGTG GCGTGACGAT 
GACTTGCCGG CGTTCGCCGA CATGTGCGCG GACCCTCGTG TCATGCGCTA TTTTCCAGAC
CCCCTGAGCC GTCTCGAAAG TGCTGCCATG ATCGGGCGGC TGCGTGGTCA TTTTGCCGAA
CTGGGCTTCG GGTTCTGGGC GCTGGAGCGC AAGGACACCG GCGAGTTCAT AGGTTTCACC
GGGCTGCATG TCGTGGGTTT CAAGGCACCG TTCACCCCAG CCGTGGAAAT CGGCTGGCGG
CTGGCGCACA AACACTGGGG CCTGGGCTTT GCCAGCGAGG CGGCCTGGAC CGCGCTGGGC
TGTGGTTTCG AGCGCCTGGA GCTGAAGGAG ATCGTGTCGT TCACGGCGGT CAACAATCAG
CCGTCGCAAA AGGTGATGCA GGCAATCGGC ATGCAGCAGG ATGAGTCCGG CAACTTCGAT
CACCCCAATC TTGCGGACGG CCACCCGCTC AAACCGCACG TGCTGTACCG GATCAGCCAT
GAGCAGTGGC TCAAGACGCT GAAGCCTTGA
 
Protein sequence
MEPILKLDSA RLLMRQWRDD DLPAFADMCA DPRVMRYFPD PLSRLESAAM IGRLRGHFAE 
LGFGFWALER KDTGEFIGFT GLHVVGFKAP FTPAVEIGWR LAHKHWGLGF ASEAAWTALG
CGFERLELKE IVSFTAVNNQ PSQKVMQAIG MQQDESGNFD HPNLADGHPL KPHVLYRISH
EQWLKTLKP