Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4294 |
Symbol | |
ID | 3369834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5120635 |
End bp | 5121204 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654654 |
Product | histone deacetylase family protein |
Protein accession | YP_237362 |
Protein GI | 66047521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCGA TACTCAAGCT TGATAGCGCC CGACTGCTGA TGCGGCAGTG GCGTGACGAT GACTTGCCGG CGTTCGCCGA CATGTGCGCG GACCCTCGTG TCATGCGCTA TTTTCCAGAC CCCCTGAGCC GTCTCGAAAG TGCTGCCATG ATCGGGCGGC TGCGTGGTCA TTTTGCCGAA CTGGGCTTCG GGTTCTGGGC GCTGGAGCGC AAGGACACCG GCGAGTTCAT AGGTTTCACC GGGCTGCATG TCGTGGGTTT CAAGGCACCG TTCACCCCAG CCGTGGAAAT CGGCTGGCGG CTGGCGCACA AACACTGGGG CCTGGGCTTT GCCAGCGAGG CGGCCTGGAC CGCGCTGGGC TGTGGTTTCG AGCGCCTGGA GCTGAAGGAG ATCGTGTCGT TCACGGCGGT CAACAATCAG CCGTCGCAAA AGGTGATGCA GGCAATCGGC ATGCAGCAGG ATGAGTCCGG CAACTTCGAT CACCCCAATC TTGCGGACGG CCACCCGCTC AAACCGCACG TGCTGTACCG GATCAGCCAT GAGCAGTGGC TCAAGACGCT GAAGCCTTGA
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Protein sequence | MEPILKLDSA RLLMRQWRDD DLPAFADMCA DPRVMRYFPD PLSRLESAAM IGRLRGHFAE LGFGFWALER KDTGEFIGFT GLHVVGFKAP FTPAVEIGWR LAHKHWGLGF ASEAAWTALG CGFERLELKE IVSFTAVNNQ PSQKVMQAIG MQQDESGNFD HPNLADGHPL KPHVLYRISH EQWLKTLKP
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