Gene Psyr_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4290 
Symbol 
ID3369830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5116745 
End bp5117734 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID637654650 
Producthypothetical protein 
Protein accessionYP_237358 
Protein GI66047517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC CGCTTCTGGT CCTGTTGTTG AGCACTGCCT TCGTGAGCCT CGGGGCGCAT 
GCCGAGGATC AAGCGGTCAA TTCCATCAGC CCGGATCGCC TCGCCATCAA TGGCGCCGAG
GCGACCCTCG GGCTGAGCCA GGAGTGGGTA CACCCCAAGC CGAAGATCGA GCGCGTGGTG
ATCGTCCTGC ACGGTCGCCT GCGCAATGCG CAAACCTACC TGCGCAGCAT CGAACGTGCG
GCCAACCAGT CCAGAGAGCG CGGCAAGACC CTGCTGATCG CCCCGCAATT CCTGGATGAA
AAGGATATCG TCGCGCACCA CTTGCCGGAC TCGATCCTGC GCTGGCGCCA GAACAGCTGG
ATGGAAGGCG CAACCTCCAC CGATCCCAAG CCGGTCAGCT CGTTTCTGGT GCTGGACCAC
ATCCTCAAGC GCCTGAGCGA CAGCAAGCTG TTCCCCAACC TGAAGGAAAT CGTCATTGCC
GGGCACTCCG GTGGTGCCCA GGTGGTGCAG CGCTACGCGA TGATCGGCGG CAAGGAAGAC
GCCCTGCTGC AGCGTGAAGG GGTGAAGCTG CGCTACGTGA TCGCCAATCC GTCGTCCTAC
GCCTATTTCG ACGCGGAACG GCCTGAGCCG GTAACCGCGC AAAGCTGCCC GAACTTCAAC
GACTGGAAAT ACGGCCTCAA CAAGATGCCG TTCTACTCGG GCAAGGAAAA GCCGGCTGAC
ATCGAGAAGA ATTACGTGAA GCGCGACATC ACTTACCTGA TGGGCGAGCT GGACACCGAC
CGTAACCACC CGGCGCTGGA CAAGACCTGC GCCGCCGAAG CGCAAGGCGC CTACCGCCTG
ATTCGCGGGC AGAACTACTT CAACTATCTG CAGAAGCGTC ACCCCGAGGG GCTGAACCAG
CGCCTGGTGA TCGTGCCGAA AGTCGGCCAC AACGGCGACG GGATCTTCAC CTCACCGGAA
GGCCAGGCGG TGCTGTTCAA GCCGTTTTGA
 
Protein sequence
MIKPLLVLLL STAFVSLGAH AEDQAVNSIS PDRLAINGAE ATLGLSQEWV HPKPKIERVV 
IVLHGRLRNA QTYLRSIERA ANQSRERGKT LLIAPQFLDE KDIVAHHLPD SILRWRQNSW
MEGATSTDPK PVSSFLVLDH ILKRLSDSKL FPNLKEIVIA GHSGGAQVVQ RYAMIGGKED
ALLQREGVKL RYVIANPSSY AYFDAERPEP VTAQSCPNFN DWKYGLNKMP FYSGKEKPAD
IEKNYVKRDI TYLMGELDTD RNHPALDKTC AAEAQGAYRL IRGQNYFNYL QKRHPEGLNQ
RLVIVPKVGH NGDGIFTSPE GQAVLFKPF