Gene Psyr_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4248 
Symbol 
ID3369788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5063393 
End bp5065867 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content55% 
IMG OID637654608 
Producthypothetical protein 
Protein accessionYP_237316 
Protein GI66047475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACC GACACCCTCA CGCCGCGAGT TCCGTGGCGG CCAGTGCAGT TCAAGCCCAA 
ACCCGGTGGC AAGCCTTCGG CTTCGGATCT GCCGAAAGTC ATCGCGAACG TCACGCCCGT
GCCAGGGCAC ACACCGACTT TCAGCCGACC AACATTTATG TAACGAAAGG CGATCAACTG
GAAATAACAG CAACCAGTCT GTACATGAAT CGGGTATCCG CAGTGATCGG GGTGCCGGAA
CTGGATACTC CCACCTCGTA CCCGCTGCAA CGTGGCCTGA ACGTTCTTGT CGCTACCAAC
ACAGGCCTAC TGGGCTTTAC CAATCTGGAC CCGCTTGGTC ACGTGGTACT GGACATAACA
GGACAGTACA ACCATGTGCC GTTTTTCAGA ATGGATATGA CCAACCTGGA ATGGGAACAG
CAGATGGCGC AATACAGCAA TGCGCCTGTC GTGCTGCTTA CCAGCCCGAG GGCTATTGTC
GTGGTGCGCT ATCAGAGCGC ACAGCTTTAC CTGACCGATC CCGCAAAGCT GATGGGCAAT
TTCGATGATG CCATTAGCGC GCAGGATGGT ATTTCAGGCG TGATCAATTA CAGCACGACG
GAGTGGGCGC TCGATCCGAG TAAACATTTC TACGTGGAAG CGGACCGGCT TTACATGTTT
GCTATGGACG GTCATATGGG GTTTAACGGA TCGGCCGCGC TCGCGCGATT ACTGTCAACC
GCCCCTGAAG ATGGTTGGGG CCCTTGGCAC GAAAGCGGCC ATCAACGACA ACTCAGCCCC
ATGACATGGG GCACCGGCAC CGGAATGACA GAGGTCACGG TCAATCTCTA CTCGATGGCC
GCCCAGGAGG TTTTCCTCGG CCGTGCTACA GGCGCTGACT CCAGTTACGC CCCCATGAAA
GAGTACCTGG CCAGTAGCCT GCGAGAGTAC GACAACATCA AGGATTCCGG GCACAAGCTT
GTCATGCTCT GGCAATTGCG CCTTAGCTTT GGTACTTCGT TCTACCCGCA ACTGCACCAG
CGCTATCGGC TTATGCACAA CCCGCCCACC GTCAGCGACG ATAAAGCGCA GCGCTTCATC
GTCGAAACCT CGCTGCTGAG CCACGTCAAT CTGGCGGAAT TCTTTGATCG CTGGGGATTG
TACCCAAACC CTGAAACCCT CAACCAGATC GCAGACCTGC CCGCACTGAC ACTGGCTATT
TGGGAAACCG ACGCTGACAC GACGATTCCA ATCCCTTTGC CGTTGTCTAC TTATATTCCG
GAACTCGCGC ATATTCTGTC CAGTGTGAAC GGCACCTTTC AAGACCGGAT AAAGTTTACC
GTTGCCGAGC AATGGTACAC GCCATACCGT TACGAAATAA CGCTCAACGG AACGTTAGTG
GCATCGGTTG ACCATGGTGA ATGCGTGGGC TGTGAAGCCC ACATCGAAGA AGGCATCGCC
TACGTTGAAG CCAGCGCCCC CATCTCCGAA GGGGACGAAG CGTCGGTCAA GGTGTTTGCT
GGGGGCAAGC TATACGCTGT GGCCAGTACG GCATCACGCC CCATCCTGCT GTTCAATATC
AAGGCCATGT TTACCGATGA CCGTTGCGCT GAACTCAGGC CCGGCATTAC CCAGCCAAGG
CTTGACGTGC TTTTCTTCAA TCTGGATGAA GAAAAGACCG ATGAACTGCA CGGCCGACTA
TTGAACCGTG CACAACGGTT ACTCCTGCAA AAAACGATAA GAAGCGTGAT CGTCAGCGCA
GGAGGTGTCC AGGTGACGTT CGAGGATGAG GTTTTCAAGA ATCATGATTA CACGATCCTG
CTGGGAGCCA CGCCCTACGC AACGCTTGAA AAGGGCTACC CCAGCGGATC CGAACTCGCC
AACAACGCTT GGATATGCCC GTGTGGAGTA GGCCATCAAG AGGTGACCAT CACGGCAGCT
GGAGGCATCG GGAAAACCTA TACCCTGTTC TCCGGCAACG TCGAACAGGC AAAAATCGCC
CTGCCCATCC GCCAGCTCTT CACCGACCAT ACGATGACTC GACTGGCAGA AGGTGTCGAT
CAGGCAAGCG TTGATGCCCT TTATATGACC GTCAATGGCA ACCCGATTAT CAGCGTGACA
AACCGGGCGT TCTACCGTTC TTATCTGGTT ATTGCCCAGA GCATGTTGTT GCGATTGACG
GTCGCGAAGG TCATCAGAAC AGATGACGTG CTGGACGTAT ATTTCGAGGG CGACACGTTC
AAAAATCACA ACTACAAGCT TTTCGTCAAC GACCTCTATG CCTCCGAGAT CACCCAAGGC
AGGGCCTACT ATTCAACTGT GTCCAATCGG GTCTGGACCA GCCGCGAAAA GTTTGAGGGT
AATGACCACT GTAGAGTGGA CGTCGAGTAT CAGGGGGTCG TGACAACGTT GTATGAGAGC
AATGCCGCAG ACGCAATGAC TGCGTCTGCG TTACAGGAAG GCGACGTCAC TCAGTGTGGC
CTGGAAAAGT TTTAA
 
Protein sequence
MDDRHPHAAS SVAASAVQAQ TRWQAFGFGS AESHRERHAR ARAHTDFQPT NIYVTKGDQL 
EITATSLYMN RVSAVIGVPE LDTPTSYPLQ RGLNVLVATN TGLLGFTNLD PLGHVVLDIT
GQYNHVPFFR MDMTNLEWEQ QMAQYSNAPV VLLTSPRAIV VVRYQSAQLY LTDPAKLMGN
FDDAISAQDG ISGVINYSTT EWALDPSKHF YVEADRLYMF AMDGHMGFNG SAALARLLST
APEDGWGPWH ESGHQRQLSP MTWGTGTGMT EVTVNLYSMA AQEVFLGRAT GADSSYAPMK
EYLASSLREY DNIKDSGHKL VMLWQLRLSF GTSFYPQLHQ RYRLMHNPPT VSDDKAQRFI
VETSLLSHVN LAEFFDRWGL YPNPETLNQI ADLPALTLAI WETDADTTIP IPLPLSTYIP
ELAHILSSVN GTFQDRIKFT VAEQWYTPYR YEITLNGTLV ASVDHGECVG CEAHIEEGIA
YVEASAPISE GDEASVKVFA GGKLYAVAST ASRPILLFNI KAMFTDDRCA ELRPGITQPR
LDVLFFNLDE EKTDELHGRL LNRAQRLLLQ KTIRSVIVSA GGVQVTFEDE VFKNHDYTIL
LGATPYATLE KGYPSGSELA NNAWICPCGV GHQEVTITAA GGIGKTYTLF SGNVEQAKIA
LPIRQLFTDH TMTRLAEGVD QASVDALYMT VNGNPIISVT NRAFYRSYLV IAQSMLLRLT
VAKVIRTDDV LDVYFEGDTF KNHNYKLFVN DLYASEITQG RAYYSTVSNR VWTSREKFEG
NDHCRVDVEY QGVVTTLYES NAADAMTASA LQEGDVTQCG LEKF