Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4248 |
Symbol | |
ID | 3369788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5063393 |
End bp | 5065867 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637654608 |
Product | hypothetical protein |
Protein accession | YP_237316 |
Protein GI | 66047475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACC GACACCCTCA CGCCGCGAGT TCCGTGGCGG CCAGTGCAGT TCAAGCCCAA ACCCGGTGGC AAGCCTTCGG CTTCGGATCT GCCGAAAGTC ATCGCGAACG TCACGCCCGT GCCAGGGCAC ACACCGACTT TCAGCCGACC AACATTTATG TAACGAAAGG CGATCAACTG GAAATAACAG CAACCAGTCT GTACATGAAT CGGGTATCCG CAGTGATCGG GGTGCCGGAA CTGGATACTC CCACCTCGTA CCCGCTGCAA CGTGGCCTGA ACGTTCTTGT CGCTACCAAC ACAGGCCTAC TGGGCTTTAC CAATCTGGAC CCGCTTGGTC ACGTGGTACT GGACATAACA GGACAGTACA ACCATGTGCC GTTTTTCAGA ATGGATATGA CCAACCTGGA ATGGGAACAG CAGATGGCGC AATACAGCAA TGCGCCTGTC GTGCTGCTTA CCAGCCCGAG GGCTATTGTC GTGGTGCGCT ATCAGAGCGC ACAGCTTTAC CTGACCGATC CCGCAAAGCT GATGGGCAAT TTCGATGATG CCATTAGCGC GCAGGATGGT ATTTCAGGCG TGATCAATTA CAGCACGACG GAGTGGGCGC TCGATCCGAG TAAACATTTC TACGTGGAAG CGGACCGGCT TTACATGTTT GCTATGGACG GTCATATGGG GTTTAACGGA TCGGCCGCGC TCGCGCGATT ACTGTCAACC GCCCCTGAAG ATGGTTGGGG CCCTTGGCAC GAAAGCGGCC ATCAACGACA ACTCAGCCCC ATGACATGGG GCACCGGCAC CGGAATGACA GAGGTCACGG TCAATCTCTA CTCGATGGCC GCCCAGGAGG TTTTCCTCGG CCGTGCTACA GGCGCTGACT CCAGTTACGC CCCCATGAAA GAGTACCTGG CCAGTAGCCT GCGAGAGTAC GACAACATCA AGGATTCCGG GCACAAGCTT GTCATGCTCT GGCAATTGCG CCTTAGCTTT GGTACTTCGT TCTACCCGCA ACTGCACCAG CGCTATCGGC TTATGCACAA CCCGCCCACC GTCAGCGACG ATAAAGCGCA GCGCTTCATC GTCGAAACCT CGCTGCTGAG CCACGTCAAT CTGGCGGAAT TCTTTGATCG CTGGGGATTG TACCCAAACC CTGAAACCCT CAACCAGATC GCAGACCTGC CCGCACTGAC ACTGGCTATT TGGGAAACCG ACGCTGACAC GACGATTCCA ATCCCTTTGC CGTTGTCTAC TTATATTCCG GAACTCGCGC ATATTCTGTC CAGTGTGAAC GGCACCTTTC AAGACCGGAT AAAGTTTACC GTTGCCGAGC AATGGTACAC GCCATACCGT TACGAAATAA CGCTCAACGG AACGTTAGTG GCATCGGTTG ACCATGGTGA ATGCGTGGGC TGTGAAGCCC ACATCGAAGA AGGCATCGCC TACGTTGAAG CCAGCGCCCC CATCTCCGAA GGGGACGAAG CGTCGGTCAA GGTGTTTGCT GGGGGCAAGC TATACGCTGT GGCCAGTACG GCATCACGCC CCATCCTGCT GTTCAATATC AAGGCCATGT TTACCGATGA CCGTTGCGCT GAACTCAGGC CCGGCATTAC CCAGCCAAGG CTTGACGTGC TTTTCTTCAA TCTGGATGAA GAAAAGACCG ATGAACTGCA CGGCCGACTA TTGAACCGTG CACAACGGTT ACTCCTGCAA AAAACGATAA GAAGCGTGAT CGTCAGCGCA GGAGGTGTCC AGGTGACGTT CGAGGATGAG GTTTTCAAGA ATCATGATTA CACGATCCTG CTGGGAGCCA CGCCCTACGC AACGCTTGAA AAGGGCTACC CCAGCGGATC CGAACTCGCC AACAACGCTT GGATATGCCC GTGTGGAGTA GGCCATCAAG AGGTGACCAT CACGGCAGCT GGAGGCATCG GGAAAACCTA TACCCTGTTC TCCGGCAACG TCGAACAGGC AAAAATCGCC CTGCCCATCC GCCAGCTCTT CACCGACCAT ACGATGACTC GACTGGCAGA AGGTGTCGAT CAGGCAAGCG TTGATGCCCT TTATATGACC GTCAATGGCA ACCCGATTAT CAGCGTGACA AACCGGGCGT TCTACCGTTC TTATCTGGTT ATTGCCCAGA GCATGTTGTT GCGATTGACG GTCGCGAAGG TCATCAGAAC AGATGACGTG CTGGACGTAT ATTTCGAGGG CGACACGTTC AAAAATCACA ACTACAAGCT TTTCGTCAAC GACCTCTATG CCTCCGAGAT CACCCAAGGC AGGGCCTACT ATTCAACTGT GTCCAATCGG GTCTGGACCA GCCGCGAAAA GTTTGAGGGT AATGACCACT GTAGAGTGGA CGTCGAGTAT CAGGGGGTCG TGACAACGTT GTATGAGAGC AATGCCGCAG ACGCAATGAC TGCGTCTGCG TTACAGGAAG GCGACGTCAC TCAGTGTGGC CTGGAAAAGT TTTAA
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Protein sequence | MDDRHPHAAS SVAASAVQAQ TRWQAFGFGS AESHRERHAR ARAHTDFQPT NIYVTKGDQL EITATSLYMN RVSAVIGVPE LDTPTSYPLQ RGLNVLVATN TGLLGFTNLD PLGHVVLDIT GQYNHVPFFR MDMTNLEWEQ QMAQYSNAPV VLLTSPRAIV VVRYQSAQLY LTDPAKLMGN FDDAISAQDG ISGVINYSTT EWALDPSKHF YVEADRLYMF AMDGHMGFNG SAALARLLST APEDGWGPWH ESGHQRQLSP MTWGTGTGMT EVTVNLYSMA AQEVFLGRAT GADSSYAPMK EYLASSLREY DNIKDSGHKL VMLWQLRLSF GTSFYPQLHQ RYRLMHNPPT VSDDKAQRFI VETSLLSHVN LAEFFDRWGL YPNPETLNQI ADLPALTLAI WETDADTTIP IPLPLSTYIP ELAHILSSVN GTFQDRIKFT VAEQWYTPYR YEITLNGTLV ASVDHGECVG CEAHIEEGIA YVEASAPISE GDEASVKVFA GGKLYAVAST ASRPILLFNI KAMFTDDRCA ELRPGITQPR LDVLFFNLDE EKTDELHGRL LNRAQRLLLQ KTIRSVIVSA GGVQVTFEDE VFKNHDYTIL LGATPYATLE KGYPSGSELA NNAWICPCGV GHQEVTITAA GGIGKTYTLF SGNVEQAKIA LPIRQLFTDH TMTRLAEGVD QASVDALYMT VNGNPIISVT NRAFYRSYLV IAQSMLLRLT VAKVIRTDDV LDVYFEGDTF KNHNYKLFVN DLYASEITQG RAYYSTVSNR VWTSREKFEG NDHCRVDVEY QGVVTTLYES NAADAMTASA LQEGDVTQCG LEKF
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