Gene Psyr_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4222 
Symbol 
ID3369762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5028997 
End bp5029782 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID637654582 
Producthypothetical protein 
Protein accessionYP_237290 
Protein GI66047449 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.525441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG GTGGTCTGGG TTTCGTCATT GCAGGGCTGG TAGTCGGTTT CATCGTTGGT 
ATGACCGGAG TCGGTGGCGG CTCGCTGATG ACGCCGATAC TGTTGTGGTT CGGCATCAAT
CCGGCGACGG CGGTCGGCAC AGACTTGCTG TACGCGGCGA TTACCAAATC CGGCGGGGTT
CTGGTCCATC GCAAGAACGA CAACATCGAC TGGAAAGTCA CCGGGCTGCT GACCCTGGGC
AGCGTCCCGG CGGTGCTCAT GACGCTGTGG TTTCTGAGCA CCCTGCATAC CGCTCCCGAA
GCGCTCAACG CGATCATCAA GCAGGCGCTG GGGTTTGTGC TGCTGCTCAC CGCCCTCGCC
GTCCTGTTCA AGAAAAAACT GCTGGCCTTC GCTCACCGAC GCGAAGACGG CTACTCGTTT
TTCAGCGGCA CCAGCCTGAC GGTATTGACC GTGATCACCG GCCTGATTCT CGGCACCATG
GTTGCACTCA CCTCGATCGG TGCGGGCGCG CTGGGCACGG TAGCGTTGTT CATCCTCTAT
CCACTGCTGC CAACCCGGCG TCTGGTGGGT ACGGAGATCG CCCACGCAGT CCCTCTTACG
CTGGTCGCAG GCCTTGGCCA TGCGAGCATG GGCAACATGA ACTGGGAGTT GCTGGGCTGG
CTGTTGATGG GCTCACTGCC CGGCATCTAC CTGGGCAGCC ATATGGCCGG TCGTGTCTCC
GATGACCTGC TACGGCCCTT CCTGGCGATT ATGCTGGGCA CGATCGGCTT CAAGCTGGCG
TTCTGA
 
Protein sequence
MEAGGLGFVI AGLVVGFIVG MTGVGGGSLM TPILLWFGIN PATAVGTDLL YAAITKSGGV 
LVHRKNDNID WKVTGLLTLG SVPAVLMTLW FLSTLHTAPE ALNAIIKQAL GFVLLLTALA
VLFKKKLLAF AHRREDGYSF FSGTSLTVLT VITGLILGTM VALTSIGAGA LGTVALFILY
PLLPTRRLVG TEIAHAVPLT LVAGLGHASM GNMNWELLGW LLMGSLPGIY LGSHMAGRVS
DDLLRPFLAI MLGTIGFKLA F