| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4205 |
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| Symbol | |
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| ID | 3369745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5000484 |
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| End bp | 5007992 |
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| Gene Length | 7509 bp |
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| Protein Length | 2502 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637654565 |
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| Product | insecticidal toxin complex protein TcdA1 |
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| Protein accession | YP_237273 |
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| Protein GI | 66047432 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTTA ATAGATTGTC CAGAATAAAA CGCTTGTCAG CGCGTGCGGG GCTGGATTCA
TTGGCTGCAC AGGCGTTGAT ATCCCCCGCA GCCTTTCGCA ACAAGCTATC GACGAGTGGT
TTATCATTCC GTGAGGTCGA TGAGCTGTAT GAATCAGCCC GTGACGAGCG AGAGGCGGCG
CTAATTTACG AGAAATGCTT GCTGGCTCGC TCCTCTCCAT TGCTGAAAAA CGCAGTGCGT
TTGGGCATCA ACCCTCCGGA CGCATCGCTA CGTGATTATG AAGAGCAGTT TGGTCATCGC
GCCAGTAGCT ATACCTTGCC AGGCTCTGTG TCATCAATGT TCTCCCCAGC GGCCTACCTT
TCGGCTCTCT ACCGGAATGC TCGCGGCCTG TACCCGGAAG AGTCGCCTTA TCACATTGAC
AAGCGCCGGC CCGACCTGAA GGGGTTATCA CTCAGTCAAA GCAATATGAA CAAGGAGGTT
TCTGCGCTCT CGCTCTCGAA CGAGGTGCTG ATGACCTTGG CTGGAGAGTC GCTGAAGCTG
GATGTAACGG CAGAGGGTCA GGGGTCGGTA TTGGAATGGC TGTCTACGTA TCGACTCAGT
GGCTCGACAC CGTATCATCA CCCCCATGCC CGTTTGCGTC AGAGTCAGAT ACAGAAGGAT
CCCAAGTTTA AACAGTTGGC GGCTAACCCT CGAGTAACGG GTTTGTTTTC CGGGGCCACC
ATGGCGGGAA TGGCGTTTGA TATTTCCCCT GAGGTGTACG CTATATTGAC GGAGGAAGTA
ACGGCGGGAA GCGCTGATGA GTTATACGCC AGAAACTTCG GCACTATTGA TCCGGAGACG
TTGATCACGC CACAGAGTCT GCGTCGTTAT TACGGACTTA GTGATGAGGA AGTGGCGCTA
TTTTCAACAG ATTATGCCAA TGGGGAGGAG GGGGCTGAAG AATACATCAA CAATTTATTG
GTGACCAGGA TAGGGGATAA GATTTATCGT CTACAAAGCG GACATCCTAC GAATACGTTA
AACTACGCTT GGTTACTGCC TCAGGCGGAC GGAACGTGGT TGTTGAAATT CAGTTTTAGT
GATGCTCAGC CTGGTTATGA TATTTTTCAG GTGAGAGTTG ATACTGCAGA CGCTATCATA
TATGAAGAAA ACCAGGAGTG GGGGGATTTT GTTCCTGGGC AATCGTATAC GGTAAGCATT
GAGGCTTCGG ATCTTCTGCA GGGTGAATTT ACAATGTCCC TGCGACGTTA TCATTATAAC
GGCTCCTATG TGAGTGGGGT CGTAAGTTAT AATGTAAATA TTATTGATTC GTTCCAGTTT
TACGTGCTTA AATTGAATAA GGCCATACGC CTGTGGCGTG CCACGGGTCT GCATCCTAAA
AGCTTGGAAG TCATTGTCAA TAGCGTTAAT CCTGTTAATA TCACCGATGA GACTTTGCAG
TTACTGTTTC AGGTTCAGCG ATGCGTACAG CGCTATGGCG TTGAGCCTGA AGAAGCCTTG
GTTCTCTGCG GAGGACTATT GTCCAACAAC AGTTATGACG ATAATCAAAG TCTGTTTGAT
CAGGTATTTA ATAGCCCGCC GCTAAATGGC GAGACGATCG CACCCTCAAC GACTTCAATA
AACCTGCTGC CGACGAACGC TACCGACAAC ACTGTTGAAA AAGCTATTTT GAAGCGCGCG
CTTAACGTTG ACGACGTGGG GCTGTTTGCC TTGCTCAGGA TTTTTGACAA CGCCGCCTCT
TCAGGCGTAT TGACTCTTAA TCTTAAAAAT TTGTCAGCGA TGTATGCCCT GAGCCGCTGG
GCCCAACTCC ACGCGTTAAG TGTGACGGAG TTAGAACAAT TATTGAAGGC TGCTGGCTTG
CCTAGGCTCA CCTCTGAACT GGAAAGTACT CAGCTATGGT CAGGCTGGTT GCAAAAGGTC
GACAGCCTGA CGCAATGGCT GAACTCGCGA AAACTGTCCG TGGCCGACCT TGAGTTGTTA
ACGCGCCCGA CATTTACGCA GGCGGCTACC ACCGAAATTT CGGCGCTGTT GGAAGAGCTT
AAGGGTGTGA TAAGTGCTCA TCCTGACGCC GATACCTTGG AAAAGCGTAT CGCCCTTCTA
GCACCCGTTT TGGTTTCGTC TTTAGCGCTA CCGTCCGCCC CAGTGGCTGA GTCGGTTCTT
GCTTGGGCCA ATGGCCTCCA GCCAGCTGAG TGGACCGTGG ATCAATTCTG GGACGGGGCG
GAGACCGACG ATGATAGCGT CGTTGCGTTT TGCTACGGTC TAGCGCAGTT GGCATTGATT
TATCACGCCA CAGGTATCAA TCCTCAAGCC TTTTCATTGT TTGTAGCCAC TCCTGCCCGG
CTCTTGGGGC CTGCACCAGA AGTTGCGGTG TTGCCGCGTT CTTTGGCAAC GGTACAAGCG
CTTTGCAACT TCAGTGCCTG GCTAAAAAGC CTGGGTGATG GAGCGTCTGC CGTGCTGGCA
GCCTTTGTGG CCGACACCCT CACTCCGGCT GATCTTGCAA GGGCGCTGAA TGATGATGCG
ACAAGGTTCG AGCAGGCTAC CAGGCAAGCC TATGCTAATA CTCAAGCAGC TTCAGAAACG
AAACTCAGTG CCTGGTCGGA GATCGACGTC GTGCTGCAGT GGGCGGCGTT GAGCACCACC
TTTGGTGTGA CACCGGTGAA TATCGGGCAG CTTCTTGCGC TGAACTATAC CGCAGGTAAC
CAGCCGCCAT GGGACGACTG GGTGCGCGTT GCGGATGCGT TCACCGCAGG GCTGACACCC
TACGAGACCA AAGGCATGGA GGCCGCTTTG GCCTCCGGAC TGAGCGCCGC CCTGTGTGGC
TATCTGCTCA AGTCCGGGAT GACTGCCCAG TTGGCAAATA ATTCGCGTGA AGGGCTCTAT
CAATATCTAC TGTTAGACAA CCTCAACGGG CCACAGGTAA TGACCTCTCG CGTGGCTGAA
GCCATCGTGA GCGTACAGAC ATTTATACAG CGGACCTTAA GTGCCGCCGA GTCACAAGGT
ACCGTAGATA AGGCGGCAGT CACGGGGCAA TTCTTTACCG ACTGGGAACG CTATAACCAG
CGCTACAGCA CCTGGGCTGG CGCGGCGAAG TTGGTCTACT ACCCGGAAAA CTATGTCGAT
CCCACGGTGC GTCTGGGCCA GAGCGGCATG ATGAATACGA TGCTGCAAAC GTTGGGGCAG
GCGCAACTCA ATACCGATAC GGTAGGGGAC GCCTTCAACA CCTACCTCAA CAGTTTTGAG
GAAGTGGCCA ACCTCAGGGT GATCAGTGGC TATCACGATA ACCTTGACGT TCATGAAGGG
AAGACCTACT TCATCGGTAC GAACCAGAGC GAAGTGCGTG AATTCTACTG GCGCAGCGCG
GACGAAGGCC GGCGCAGTGA GGACGGGCAA TTAGCGGCGA ACGCCTGGAC CGACTGGCGC
AAGATTGAGT GTGCCGCACA GCCGTGGGGG GATTGCATCC GGCCGGTGAT TTACAAATCG
CGCCTTTATC TCTGCTGGTT AGAGCGAAAA GATGTCACTC CACCTAAGGC GGACGGCTCG
CCGGGCGATC CAAAGATGTT TGATTACGCC ATCAATATTT CCTACCTACG TTACGACGGT
AACTGGACGT CACCGAAAAT CATTGATGTG ACCGAGGAGG AAAATGGCTT TGCGGCTGGC
GGTAAGCCAC CAGGGATTTA TTGCACGAGT TTTGACGCAG AAACAACCAT GGCAGTGCTG
CTCTATAGAA AAGCAGATAG TTATGCGGAT CAACTGCCAG TTCAAGCGGA TATGCGTTTA
GTCTACATTT ATGAAGACAT GGCATCGGAT CAAAGACAAA GCTCTGCTGA AACTTTTCTT
TCGTCTATGA AGTATGAGCT TGATCCCACT GAAGGCAACG TTGTCAATAA TAAATATACT
CACGGGTTGA GTTTGGGGGG CGAGTCAGTT CATGGATTAT ATGAACGGAA TTATGATATC
TCAGTCAGTT ATGGAAGTTA TACGCTCGAT GTCAATGGAT CTGAGGCTGT CGCGAAAATT
TCCATACGTA AGCGGATTAC GCTGGTGCCG AGAATTCCCA ACCCGTTAAG GCTGCTGTAT
GAATACTATA GTTCGTTCGC TGAAACACCC TTTCTTCGCG CCCTGAGCTC TGACGACGGC
AAGATATGGT TCGTCAGGCA GGGAGGGAAG ATATATTTAG CGCTGAGTAC TATTTTAACA
TGGGGAGTTC CTCTTTCTGT CTGGGTGTAC TACGGTGATG CACATGCCAG GTTGTTAGTG
CGTGAAGATG CTGTGAGTGC TGTGACGTTT GTGCTTGCGG TTTACAATGA TCCGTATCCT
GATTCGATGC TTTGTCCGAG TCCCGCAGGA TTTACTGTAA TGATACAACT TGTTACGGGT
AGTTATCAAT TTGATACGCC GCCTCAGTGG ATGGCGAATC CTTTTTACCC TTTTTCTTTC
GATCTTCTTC AGTTAAATGT TTTTGATGTC AACGGACCTC AGGCTTTTTT GGCCGGAGAT
TATGTAAGTG CTCTTCCTCC CTTTGATATA AGTGGAATGG TTTTTGACTT TGATGTTAGC
AATGTGTCGA TTAGTAAAGA ATGGGGTGTC CTTCCCTCTT ATGATGTGGC GTTCAGCTTC
AGCATTGGCG GGGTTGACAG TGATGATCGT ATACAGTGGA TTGTTCCCGT TACTCGAAAT
GCATCTGATT CAAAAAACAT CATCAAAATA AAAAACACCC CTGAAAAAGC TCAGTATATG
GAGTTCGACG CCTGTCGCAC GCGCCTCAAT ACACTGTTTG CACGCCAATT AGTGGAAAGG
GCTGCTGCAG GCATCGACAC GATTCTTAGC TACGAGACGC AAGAGATTCA GGAGCCTCAA
TTGGGGGCAG GTTTCTTCAC CACGCTCACA CTCCCGATCC ATAAGCCCGG TGTACACGGC
GATGAGCCTT GGGTAAAAAT TTACTACAAC TATTTTCTTG CTGTTAATGA TAGCTATTTG
GCGTGGTCCG GTAGTCTTAG TGCTACGAGT ACAACAGTGG TGAATCTATT TATACCCTAT
CCCGATGGCG GTTGGTTCAC AACGAACGAG GTTCATCTGC GTTTACAATA CAAAGAGGCT
GACTACAATG GTCTAAATTC CCAGAGTGTT TGGTTGCTCT ATGCGCCTGA TACTGGAGTG
GCTACTGTCA GCAGGCCTGG AACCAATTCT CTCTCAGAAG ACATTGTCAA AAGTGTTACT
GTTAAATCGC GTAGCACCGT GCCAATGGAC TTCTCAGGCG CCAATGCCCT GTATTTCTGG
GAGCTGTTCT ACTACACCCC AATGATGGCG GCGCAACGCT TCCTTCAAGA ACAACAGTTC
ACATTGGCGG ACCCATGGCT ACGTTATGTA TGGAGCCCAT CAGGTTATGT TGTTCGCGGT
CAGCATGTCG ACCGTAACTG GAACGTGCGC CCACTTCAAG AGGACACCAG TTGGAACGAC
GCCCCACTCA AAGCTGTAGA TCCTGACGCA GTGGCGCAAA ACGACCCTAT GCACTACAAG
GTCGCTACCT TCATGCGGGC GTTGGACTTG CTTATTGCGC GAGGCGACGC TGCCTACCGT
AAGCTTGAGC GAGATACCCT CGCCGAGGCG AAAGTCTGGT ACAGCCAGGC TCTGAACCTG
CTGGGGGAAC AGCCTTACAT CCGCGCCAAT GCGCTATGGG CTGAGCCATC GTTGGGCGAG
GCATCCTCTG AGGCGTTGGC TGAGCAACAC TTGACCGTAT TGAGCTTGCT GCGTGACGGG
CGAGTCGAAA CCCTTAAGTC GATGGCATCG ACAAAAACGG CAGCGGCGAG TGCCTTGTTC
CTGCCGGAAA TCAACGAGGT CATGCAGGGC TACTGGCTAA CGTTGCGCCA ACGGATGTAC
AACTTGCGGC ATAACCTGAC GCTGGACGGC CAGCCGCTGC TGTTGCCGCT ATTCGCCAAG
CCGGCGGATC CAAAGGCCCT GCTCAACGCT GCAGTGGCGG CGGAGAGTAG TGGCGGGTCA
GATCTCCCCG TGACATCTCT CCCTCTGTGG CGCTTCGAGC CGATGCTCGA CAGTGCTCGC
GGTTTGGTGT TCCAGCTCAT ACAGTTCGGT AATGCTGTTC TGGGTGTGCT TGAACGTCAG
GATGCAGAGT CGCTGAACGC CTTGTTGCAA AATCAAGGCA CTGAGCTGAT GGCTAGCACT
ATCCAGGTAC AAGAAGGCAC GCTCAGAGAG CTGGAGGCTG AAAAAAAGGT CCTTTCTCGT
TCCAAAGACA GTGCACAGCG ACGATTTGAC AGTTACTCCC GCTTATATGA TGAAGACATC
AATTCCCGCG AACGCCTGTC TATAAGTTCA CTAGAAAGCG CCAAATCGCT TGGTGCTGGA
GCTAAGGCGG CGTATATAGC CGCTGCGGCT TTGGATCTTG CCCCCAACAT CTTTGGGCTG
GCCAATGGTG GTATGAAGTT TGGTGCTGTC GGCACCATGG CGGGGCTTGG TATCTCTATA
AGTGCTGAAA ATCTAATGAT GGATAGCTCG CGCATTTCCC AGGAAGAAAT CTACCGTCGC
CGGCGCGAGG AGTGGGAAAT CCAACGTAAC AATGCAGAGG GCGAGATCCA GCAGATAGAG
GCCCAGCTAG CATCGCTCGA GGTGCGCCGC GAGTCTACTG AACTGCAGAA AGCGCATCTG
GAGATGCAAC AAGGACAAGC ACAGGCGCAG TTAGACTTTC TGCAAACCAA GTTTAGTAAT
AGCGCTCTTT ACAGCTGGCT GCGTGGTCGG TTGGCAACCA TTTACTTCCA GTTTTACGAC
CTGGCGGTGT CTCGTTGCCT GATGGCCGAA AAGGCGTGGC ACTGGGAGAG TGGCAAGAGC
GATACCTACA TTCGCGGTGG TGGATGGCAG GGTACCTGGG CTGGACTTAC CTGCGGCGAA
GGACTTATGC TCAATCTGGC GCAATTGGAA ACTGCCCGGA TGAAGTGGTC TAAACGCGCG
CTTGAAATCA CACGGACAGT TTCGCTGGCT GATTTTTACC GCAGCACATT GGCAGAAACC
GATCAATTTG AGCTGTCAGC AGCGGTGTCG GCGTTGCTGA ACGGGGATAC GCCCCCAGAG
GGCAGCGCCG AGCGTGTCAG GCTGGACGAA AGCGGCGCGT TAACGGCTTC AATTACACTG
GCAGATCTGA ATATAGTTGA TGACTACCCC GGCGGGCTGG GAGATCAGCG CCGAATCAAA
CAGGTCAGCG TATCACTGCC CGCCTTGTTG GGGCCTTATC AGGATATTCA GGCGGTACTC
AATTACACCG GCGGGGGGAA CGTTTTACCG CCGGGTTGCG ACAACATGGC AATTTCGCGA
GGAGTGAATG ACAGCGGTCA GTTTCAACCC GACTTTAATG ACCCACGTTG GTTACCGTTT
GAAGGGGCAG ATATCAGGGA GGGCAGCATG ATAATCAGCT TCCCGCAGGC CGAAACGAAA
CAGAAGGCGC TGCTGGAAAG CCTGAACGAT ATCATTTTGC ACATCAACTA CACGATCCGC
TCTTTATAG
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| Protein sequence | MGLNRLSRIK RLSARAGLDS LAAQALISPA AFRNKLSTSG LSFREVDELY ESARDEREAA
LIYEKCLLAR SSPLLKNAVR LGINPPDASL RDYEEQFGHR ASSYTLPGSV SSMFSPAAYL
SALYRNARGL YPEESPYHID KRRPDLKGLS LSQSNMNKEV SALSLSNEVL MTLAGESLKL
DVTAEGQGSV LEWLSTYRLS GSTPYHHPHA RLRQSQIQKD PKFKQLAANP RVTGLFSGAT
MAGMAFDISP EVYAILTEEV TAGSADELYA RNFGTIDPET LITPQSLRRY YGLSDEEVAL
FSTDYANGEE GAEEYINNLL VTRIGDKIYR LQSGHPTNTL NYAWLLPQAD GTWLLKFSFS
DAQPGYDIFQ VRVDTADAII YEENQEWGDF VPGQSYTVSI EASDLLQGEF TMSLRRYHYN
GSYVSGVVSY NVNIIDSFQF YVLKLNKAIR LWRATGLHPK SLEVIVNSVN PVNITDETLQ
LLFQVQRCVQ RYGVEPEEAL VLCGGLLSNN SYDDNQSLFD QVFNSPPLNG ETIAPSTTSI
NLLPTNATDN TVEKAILKRA LNVDDVGLFA LLRIFDNAAS SGVLTLNLKN LSAMYALSRW
AQLHALSVTE LEQLLKAAGL PRLTSELEST QLWSGWLQKV DSLTQWLNSR KLSVADLELL
TRPTFTQAAT TEISALLEEL KGVISAHPDA DTLEKRIALL APVLVSSLAL PSAPVAESVL
AWANGLQPAE WTVDQFWDGA ETDDDSVVAF CYGLAQLALI YHATGINPQA FSLFVATPAR
LLGPAPEVAV LPRSLATVQA LCNFSAWLKS LGDGASAVLA AFVADTLTPA DLARALNDDA
TRFEQATRQA YANTQAASET KLSAWSEIDV VLQWAALSTT FGVTPVNIGQ LLALNYTAGN
QPPWDDWVRV ADAFTAGLTP YETKGMEAAL ASGLSAALCG YLLKSGMTAQ LANNSREGLY
QYLLLDNLNG PQVMTSRVAE AIVSVQTFIQ RTLSAAESQG TVDKAAVTGQ FFTDWERYNQ
RYSTWAGAAK LVYYPENYVD PTVRLGQSGM MNTMLQTLGQ AQLNTDTVGD AFNTYLNSFE
EVANLRVISG YHDNLDVHEG KTYFIGTNQS EVREFYWRSA DEGRRSEDGQ LAANAWTDWR
KIECAAQPWG DCIRPVIYKS RLYLCWLERK DVTPPKADGS PGDPKMFDYA INISYLRYDG
NWTSPKIIDV TEEENGFAAG GKPPGIYCTS FDAETTMAVL LYRKADSYAD QLPVQADMRL
VYIYEDMASD QRQSSAETFL SSMKYELDPT EGNVVNNKYT HGLSLGGESV HGLYERNYDI
SVSYGSYTLD VNGSEAVAKI SIRKRITLVP RIPNPLRLLY EYYSSFAETP FLRALSSDDG
KIWFVRQGGK IYLALSTILT WGVPLSVWVY YGDAHARLLV REDAVSAVTF VLAVYNDPYP
DSMLCPSPAG FTVMIQLVTG SYQFDTPPQW MANPFYPFSF DLLQLNVFDV NGPQAFLAGD
YVSALPPFDI SGMVFDFDVS NVSISKEWGV LPSYDVAFSF SIGGVDSDDR IQWIVPVTRN
ASDSKNIIKI KNTPEKAQYM EFDACRTRLN TLFARQLVER AAAGIDTILS YETQEIQEPQ
LGAGFFTTLT LPIHKPGVHG DEPWVKIYYN YFLAVNDSYL AWSGSLSATS TTVVNLFIPY
PDGGWFTTNE VHLRLQYKEA DYNGLNSQSV WLLYAPDTGV ATVSRPGTNS LSEDIVKSVT
VKSRSTVPMD FSGANALYFW ELFYYTPMMA AQRFLQEQQF TLADPWLRYV WSPSGYVVRG
QHVDRNWNVR PLQEDTSWND APLKAVDPDA VAQNDPMHYK VATFMRALDL LIARGDAAYR
KLERDTLAEA KVWYSQALNL LGEQPYIRAN ALWAEPSLGE ASSEALAEQH LTVLSLLRDG
RVETLKSMAS TKTAAASALF LPEINEVMQG YWLTLRQRMY NLRHNLTLDG QPLLLPLFAK
PADPKALLNA AVAAESSGGS DLPVTSLPLW RFEPMLDSAR GLVFQLIQFG NAVLGVLERQ
DAESLNALLQ NQGTELMAST IQVQEGTLRE LEAEKKVLSR SKDSAQRRFD SYSRLYDEDI
NSRERLSISS LESAKSLGAG AKAAYIAAAA LDLAPNIFGL ANGGMKFGAV GTMAGLGISI
SAENLMMDSS RISQEEIYRR RREEWEIQRN NAEGEIQQIE AQLASLEVRR ESTELQKAHL
EMQQGQAQAQ LDFLQTKFSN SALYSWLRGR LATIYFQFYD LAVSRCLMAE KAWHWESGKS
DTYIRGGGWQ GTWAGLTCGE GLMLNLAQLE TARMKWSKRA LEITRTVSLA DFYRSTLAET
DQFELSAAVS ALLNGDTPPE GSAERVRLDE SGALTASITL ADLNIVDDYP GGLGDQRRIK
QVSVSLPALL GPYQDIQAVL NYTGGGNVLP PGCDNMAISR GVNDSGQFQP DFNDPRWLPF
EGADIREGSM IISFPQAETK QKALLESLND IILHINYTIR SL
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