| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4089 |
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| Symbol | |
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| ID | 3369625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4874589 |
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| End bp | 4876625 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654447 |
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| Product | PAS |
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| Protein accession | YP_237157 |
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| Protein GI | 66047316 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.465781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTGC GCCAACGCCT GGAAAACCTG CCCGTCGGCC AGAAACTGCT GGCCGCCCTG
CTGGTCCTGA TGACCACCGT ACTGCTGGTC GCCAACCTGA CCTTCATCAG CGCGGCCTAT
TACATCTCTC AGGAGGCGAT GGCTCCGCAG GCCCTGCAGA CCATCGGCCG GCTGATCAGC
AGCGCCAATC TCAACGAGCG GGCCTTGTAC TCGCCTGATG AGGCGCGCGC GCTGCTCAAG
GAGCTGAGAA GCTACGGGCC GTTGCGTGCC GCAGCCCTGT ATGACAACAA CGGCGAGCGG
CTTGAACAGA TGCATCAGGG CGAAAGCCTT GAGCTGCCCA GACGCTTTAA AGACCTGGAT
AGCTGGCGCC TCACCGAATT TCGCAGCACG CAAGTCATCA CCGTACCCAA AGGTGACGAG
CCGCCAGGGC ATCTGCTGCT GGTGGCCAGC AGCGAGCTGC CACCGGCGTT CTACACCGGC
ACGCTCACCG CCAGCCTGGG CATTCTGGTG TTCAGCGTGT TGCTGTGGCT GGTGGTGGCG
CGGCAGATTC GCCGACTGAT CACCGAGCCC ATTTACCAAC TGGAAGAATT GTCCCGGCAG
GTGACCCGCG AAGAGAACTA CGCACTGCGC GCAGAACCCG GCAACGATGA TGAAATCGGC
AGTCTGGCCG AGGCGTTCAA TACCATGCTG TCGCGTATCG AAGCGCGTGA ACAGCAACTC
AAGCGCGCGC GCGACGACTC GCAGGAAGCC TACGATCAGG CCCAGGGGCT GGCCGAGGAA
ACCCGCCACA CCAACCGCAA GCTGGAGCTG GAAGTCCAGG TGCGCAGCAA GATCGAGAAG
AAGCTCACCG GCTTTCAGAA TTACCTCAAC AGCATCATCG ACTCGATGCC CTCGGCGATG
ATTGCGCTGG ATGAACAGTT GTACGTCACC CAGTGGAATC AGGAAGCCAC AGCACTGTCC
GGCACCACAC TGGACGAAGC GCTGAACCAG CCGATCTTCC TGGCCTTCGA GCCGATGCGC
TCGTTTCTGC CGCAGATCAA GCACACCGTC GAGCGCCACA GCGTGACCAA GATCGAGCGC
GTGACCTGGA TCAAGAATGA CGAGCCCCGC CACTACGCTC TGACGTTCTA CCCGTTGACT
GGCGATGCCG GGCGCGGCGT GGTGATCCGG ATCGATGACA TCACCCAGCG CATATCGCTG
GAAGAAATGA TGGTGCAGTC GGAAAAAATG CTGTCTGTCG GCGGTCTGGC AGCAGGCATG
GCGCATGAGA TCAACAACCC GCTGGGCGCC ATACTGCACA ACGTACAGAA CATACGTCGG
CGGCTGTCCC CGGAACTGCC GAAGAACATC GAGCAGGCCG AGGCCGACGG CATCGATCTG
GCGCAGGTCA ACCATTACCT GGAAAGCCGC GAAGTGCCGA AACTGCTCGA CGGTATTCAA
CAGGCCGGTG CCAGGGCCGC AAAAATTGTC AGCCACATGC TCAATTTCAG CCGCCTGAGC
AGTCGGCAGT TATCGCCCTG CGACTTGCCG GCCTTGATCG ATCAGGCCGT GGAGATCGCC
AGTAACGACT TCGATCTGAC CATCGGCTTC GACTTCAAGG GTCAGCACAT CATCCGTCAG
TTCGACCCCG AACTGGGTCC GGTACCATGC ATCGCCAACG AGCTGGAGCA GGTGCTGCTG
AACCTGCTGA AGAACGCCGC GCAGGCCATC CACCAGCGGC CGGAGAGCGA AGAGCCTGGG
CGCATTACCC TGCGCACGCG TCTCAATCCG CCGTGGGCCG AGATTCAGGT GGAGGACAAT
GGCATCGGCA TGTCGGAGAG CATCCGCAAG CGTACGTTCG AGCCGTTTTT CACCACCAAG
GAAATCGGCC AGGGCACCGG GCTGGGTCTG TCGGTGTCCT ACTTCATTGT CACCAACAAC
CACAAAGGCC AGATGGAGGT ACATTCCTCT CTCGGCACAG GCACCTGCTT TACGCTGCGT
CTACCGCTGG TGGCCAACCC GGTCAGCGTT CAGCAGCAGG TCATTTCAAA ATCCTGA
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| Protein sequence | MPLRQRLENL PVGQKLLAAL LVLMTTVLLV ANLTFISAAY YISQEAMAPQ ALQTIGRLIS
SANLNERALY SPDEARALLK ELRSYGPLRA AALYDNNGER LEQMHQGESL ELPRRFKDLD
SWRLTEFRST QVITVPKGDE PPGHLLLVAS SELPPAFYTG TLTASLGILV FSVLLWLVVA
RQIRRLITEP IYQLEELSRQ VTREENYALR AEPGNDDEIG SLAEAFNTML SRIEAREQQL
KRARDDSQEA YDQAQGLAEE TRHTNRKLEL EVQVRSKIEK KLTGFQNYLN SIIDSMPSAM
IALDEQLYVT QWNQEATALS GTTLDEALNQ PIFLAFEPMR SFLPQIKHTV ERHSVTKIER
VTWIKNDEPR HYALTFYPLT GDAGRGVVIR IDDITQRISL EEMMVQSEKM LSVGGLAAGM
AHEINNPLGA ILHNVQNIRR RLSPELPKNI EQAEADGIDL AQVNHYLESR EVPKLLDGIQ
QAGARAAKIV SHMLNFSRLS SRQLSPCDLP ALIDQAVEIA SNDFDLTIGF DFKGQHIIRQ
FDPELGPVPC IANELEQVLL NLLKNAAQAI HQRPESEEPG RITLRTRLNP PWAEIQVEDN
GIGMSESIRK RTFEPFFTTK EIGQGTGLGL SVSYFIVTNN HKGQMEVHSS LGTGTCFTLR
LPLVANPVSV QQQVISKS
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