Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4082 |
Symbol | |
ID | 3369618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4867880 |
End bp | 4869439 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637654440 |
Product | hypothetical protein |
Protein accession | YP_237150 |
Protein GI | 66047309 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.449833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.903011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTAC GTGACATAAA CTCCGTAACG CGCTGGGGTA TTGCAGGAAT TTTAGGTGCC GTCTTACTAG CATACAGCGG GCATTGGTGG GGAAACGCTG TTGCTCATGA AAAAACTGAG CTGGCGGCTT ATAAATCCAA TGTGGCAGCA CAAGTCTCAG AGCAGCAGGC AACACAAAAA CGAACATCTG CGTTGGAAAT TCGAGGGGTG GGAATCGCTG TAGGTGGATG GCACCAATCA TCCATATGGC GAAAAGTTCA AGAAAAGAGA AATAACTTTA TTTCAATATA CTCCCAGAAC CCTGAGGACT ATACCGACTC TTTGCTCTCC CGAGAGAATA CCCAAAAAAT TAATACCCGT GCAGCATTCA AACACTCTGC TGGAGAGTCT GTCTCTTATT GGCCAATACC CACTTTTGCG CTGGGGCCTC CCAATCCTTA CGAGAAGCCC TACCGTGCCG CAGATCTGAT CAACTTTGGC CGGAATCAAG CAACACTAGG CGTCACCCAG CTTCTCTGGC AAAACGATGA AAACACTAGC CAAGCACAAA GCATGATAGA ACGGCTGTTT CAGTTTTTTG AAGACAATCA GAAAGTTCCG CAAGCACTGA TTGCAAGCGA GGACGGGGAC GTTACGCGAG ATATTTATCG TAAACGCGGC ACGCCCGGCC TCCAAAATGC GCAAGTCGTA CCGACAGTTT TCGAAAGCAT GACAGGCCTG CTGATTACTC GCTCGGACCG GGTGGATCGC TACGTTCGTC CTTATGCGAC TAACGACGCA GAAGACAACC AGAACAAAGA TACCGATCTG GGCAAGCTTT GGGCTTTCTA CTGGGAGCAG CCGCGTAAAT TCAGAAAAGT CTATGAGGAT GCGCAGAAGA CCAAAGGAAT TAAAGATCCA TTAGGCCCAG GCACCATGTC CACCGCCTAC TGGCAAGCTC AACTCCCCAC CCTCTGGAAA ACCATCAGCA ACCGTGGTCC CGGCAATTTC GAACCCTCCC CTTGGCTGCC GATCCGCTGG GGTCAGCATC AGGTCAAGGA GTTCGATGCT GCGCCGGTAC TCGGCTATCT GCACCGCCCG ATCAAGGCGC CCATGCAGGA TGAAAACGGC AAGCGCCTGA AACCGGCCTT GCAAGCCAAA GCGTTGCAAG CCGCCTGGGT GCAGGCGCTG GATACCTTGC CAGATGGTCA GAAACCTGTG CGGGTGTTCT ACGACAGCAC CAATAACCCG GAAGCGGAAA TCGCCCTGAA CAACGCCCTG CACGACCTGA ACAAGGACGG CCATGGTCTT GAGCTTGGCA ATGTCGAAGA GGGCTACGAC ATCGGTCGTC GTCTGGGTAA TACCGGGGTT AGTGGTGCGC TGGTCGAGAT CAATCTGGCG ACCATCGCCA GTTACAAGGA TGGCGGCGTC AGCGCCGTGA TCTACGCCGG CACCGATGGC AGCCTGACCG TACAAATGGT CCGCCCGCCC GATGAAGCCC GTAAAGCGAA GAACAGTCAG AACCGCGGCG CAGACCCGTT CACCTTCGGC TCGCCAACCG GCGGGGCACC TGCAGAGTGA
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Protein sequence | MELRDINSVT RWGIAGILGA VLLAYSGHWW GNAVAHEKTE LAAYKSNVAA QVSEQQATQK RTSALEIRGV GIAVGGWHQS SIWRKVQEKR NNFISIYSQN PEDYTDSLLS RENTQKINTR AAFKHSAGES VSYWPIPTFA LGPPNPYEKP YRAADLINFG RNQATLGVTQ LLWQNDENTS QAQSMIERLF QFFEDNQKVP QALIASEDGD VTRDIYRKRG TPGLQNAQVV PTVFESMTGL LITRSDRVDR YVRPYATNDA EDNQNKDTDL GKLWAFYWEQ PRKFRKVYED AQKTKGIKDP LGPGTMSTAY WQAQLPTLWK TISNRGPGNF EPSPWLPIRW GQHQVKEFDA APVLGYLHRP IKAPMQDENG KRLKPALQAK ALQAAWVQAL DTLPDGQKPV RVFYDSTNNP EAEIALNNAL HDLNKDGHGL ELGNVEEGYD IGRRLGNTGV SGALVEINLA TIASYKDGGV SAVIYAGTDG SLTVQMVRPP DEARKAKNSQ NRGADPFTFG SPTGGAPAE
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