Gene Psyr_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4082 
Symbol 
ID3369618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4867880 
End bp4869439 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content54% 
IMG OID637654440 
Producthypothetical protein 
Protein accessionYP_237150 
Protein GI66047309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.449833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.903011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTAC GTGACATAAA CTCCGTAACG CGCTGGGGTA TTGCAGGAAT TTTAGGTGCC 
GTCTTACTAG CATACAGCGG GCATTGGTGG GGAAACGCTG TTGCTCATGA AAAAACTGAG
CTGGCGGCTT ATAAATCCAA TGTGGCAGCA CAAGTCTCAG AGCAGCAGGC AACACAAAAA
CGAACATCTG CGTTGGAAAT TCGAGGGGTG GGAATCGCTG TAGGTGGATG GCACCAATCA
TCCATATGGC GAAAAGTTCA AGAAAAGAGA AATAACTTTA TTTCAATATA CTCCCAGAAC
CCTGAGGACT ATACCGACTC TTTGCTCTCC CGAGAGAATA CCCAAAAAAT TAATACCCGT
GCAGCATTCA AACACTCTGC TGGAGAGTCT GTCTCTTATT GGCCAATACC CACTTTTGCG
CTGGGGCCTC CCAATCCTTA CGAGAAGCCC TACCGTGCCG CAGATCTGAT CAACTTTGGC
CGGAATCAAG CAACACTAGG CGTCACCCAG CTTCTCTGGC AAAACGATGA AAACACTAGC
CAAGCACAAA GCATGATAGA ACGGCTGTTT CAGTTTTTTG AAGACAATCA GAAAGTTCCG
CAAGCACTGA TTGCAAGCGA GGACGGGGAC GTTACGCGAG ATATTTATCG TAAACGCGGC
ACGCCCGGCC TCCAAAATGC GCAAGTCGTA CCGACAGTTT TCGAAAGCAT GACAGGCCTG
CTGATTACTC GCTCGGACCG GGTGGATCGC TACGTTCGTC CTTATGCGAC TAACGACGCA
GAAGACAACC AGAACAAAGA TACCGATCTG GGCAAGCTTT GGGCTTTCTA CTGGGAGCAG
CCGCGTAAAT TCAGAAAAGT CTATGAGGAT GCGCAGAAGA CCAAAGGAAT TAAAGATCCA
TTAGGCCCAG GCACCATGTC CACCGCCTAC TGGCAAGCTC AACTCCCCAC CCTCTGGAAA
ACCATCAGCA ACCGTGGTCC CGGCAATTTC GAACCCTCCC CTTGGCTGCC GATCCGCTGG
GGTCAGCATC AGGTCAAGGA GTTCGATGCT GCGCCGGTAC TCGGCTATCT GCACCGCCCG
ATCAAGGCGC CCATGCAGGA TGAAAACGGC AAGCGCCTGA AACCGGCCTT GCAAGCCAAA
GCGTTGCAAG CCGCCTGGGT GCAGGCGCTG GATACCTTGC CAGATGGTCA GAAACCTGTG
CGGGTGTTCT ACGACAGCAC CAATAACCCG GAAGCGGAAA TCGCCCTGAA CAACGCCCTG
CACGACCTGA ACAAGGACGG CCATGGTCTT GAGCTTGGCA ATGTCGAAGA GGGCTACGAC
ATCGGTCGTC GTCTGGGTAA TACCGGGGTT AGTGGTGCGC TGGTCGAGAT CAATCTGGCG
ACCATCGCCA GTTACAAGGA TGGCGGCGTC AGCGCCGTGA TCTACGCCGG CACCGATGGC
AGCCTGACCG TACAAATGGT CCGCCCGCCC GATGAAGCCC GTAAAGCGAA GAACAGTCAG
AACCGCGGCG CAGACCCGTT CACCTTCGGC TCGCCAACCG GCGGGGCACC TGCAGAGTGA
 
Protein sequence
MELRDINSVT RWGIAGILGA VLLAYSGHWW GNAVAHEKTE LAAYKSNVAA QVSEQQATQK 
RTSALEIRGV GIAVGGWHQS SIWRKVQEKR NNFISIYSQN PEDYTDSLLS RENTQKINTR
AAFKHSAGES VSYWPIPTFA LGPPNPYEKP YRAADLINFG RNQATLGVTQ LLWQNDENTS
QAQSMIERLF QFFEDNQKVP QALIASEDGD VTRDIYRKRG TPGLQNAQVV PTVFESMTGL
LITRSDRVDR YVRPYATNDA EDNQNKDTDL GKLWAFYWEQ PRKFRKVYED AQKTKGIKDP
LGPGTMSTAY WQAQLPTLWK TISNRGPGNF EPSPWLPIRW GQHQVKEFDA APVLGYLHRP
IKAPMQDENG KRLKPALQAK ALQAAWVQAL DTLPDGQKPV RVFYDSTNNP EAEIALNNAL
HDLNKDGHGL ELGNVEEGYD IGRRLGNTGV SGALVEINLA TIASYKDGGV SAVIYAGTDG
SLTVQMVRPP DEARKAKNSQ NRGADPFTFG SPTGGAPAE