| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4068 |
|---|
| Symbol | |
|---|
| ID | 3369604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4851683 |
|---|
| End bp | 4852363 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637654426 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_237136 |
|---|
| Protein GI | 66047295 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0610803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC GCATCGAACT CGAGTTTTCC CGAAAGTACG ACAAGACACA CGCCCGCCAG
TACCTGGAAA AGCATCAGGA CGGTATCTGG CGCAAGCTGT CGCATCATCG CGATGAACAG
TTGGCGAGAA AGGCGCTGCA CATGGCCGGA GACCCGGGCC TGGTGCTGGA CCTGCCTTGT
GGTGCCGGAC GCTTCTGGCC ATTGTTGGCC GAGAAGCCGA ACCGCTCGAT CATCGGTGCC
GATAACTCCG CAGACATGCT CAGTACCGCC TGTGCCTCGC AGCCGGCAGA CGTTGTAAAA
CGGGTACAAC CTTTGCAGAC ATCTGCCTTT GCCATCGACC TGCCGGATAA CGCAGTAGAC
AGCATTTTCT GCATGCGCTT GTTGCACCAT GTCGGTCAGT CCAGCGACCG GATGGCTCTA
TTGCGCGAGT TTCAGCGCGT GACCCGTGAC AGTGTGATCG TCTCCCTCTG GGTTGATGGC
AATTTCAAGG CATGGAAGCG TGCGCGCCTG GAGAACAAGC GCCAGCAAAA AACCGGGCGG
GAAAGTTACC AGAATCGTTT TGTGTTACCT GTTGTTACCG CAGAAACCGA ATTTGAGCAG
GCAGGATTTC GCATTCAGAA CCGAATGGAT TTCCTGCCCA TGTACGCCAT GTGGCGAGTC
TATGTCCTAC GTAAAAGGTA A
|
|---|
| Protein sequence | MSDRIELEFS RKYDKTHARQ YLEKHQDGIW RKLSHHRDEQ LARKALHMAG DPGLVLDLPC
GAGRFWPLLA EKPNRSIIGA DNSADMLSTA CASQPADVVK RVQPLQTSAF AIDLPDNAVD
SIFCMRLLHH VGQSSDRMAL LREFQRVTRD SVIVSLWVDG NFKAWKRARL ENKRQQKTGR
ESYQNRFVLP VVTAETEFEQ AGFRIQNRMD FLPMYAMWRV YVLRKR
|
|---|
| |