Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4034 |
Symbol | |
ID | 3369570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4807308 |
End bp | 4810253 |
Gene Length | 2946 bp |
Protein Length | 981 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637654392 |
Product | hypothetical protein |
Protein accession | YP_237102 |
Protein GI | 66047261 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.183889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC AACCCTTCTC CCTTCTACGC AACCTGGCCC GAACCGGGAA CGACACGCAC GAACATGGCG ATGACACGTT ACCGTTCATC AACGCGATGG AAAAACTGAA CATCCATTCA GTGTTCGATA TCGTACGGCG CTCCAAAAGC GCTTTTGTTC ACGAACTCTC ACGTATCAGT GATGCTGATG CAGCGCTCGC CTATGAAAAC GCTCGCTGTT ACGCCACCCA GATCGTGCGC CTGTATCGCA ATCAACTGCT GTCTTCAGGC CGGCCCCAGC CAGTGACACG GCGCACCGGC GTGCGTTCAC TGGTAGACAT CGGGCCCAGC TTTCCCAATC TTTTCAAGGA AAACTGGGAT CTGTTTTGCA AGGTGGGTGC GATAGAAGCC AAGGATTCGC CCGTTGCGTA CCTGACGTCC TTGTACCGGT TTGCTCTGGA ACAGCTGGAA GGCAGCGTCG CGGAGGACAG CCGAATCAAA CTCCATGACC GACGGCCTGA TCTCAAGGGT CTGTTGATCG ACCAACAAAG CACCTTCACG CCAGTGCCTA CGCTGCACAT CGTCAATCAG GTGTTAAGTA AAGCCATCAA TGCCTACGTG GACACGGTGC CTGGGGACAA GGGCAAGTCT ATTTACCAAT TGGTGGCCGA AAAACAACAC CCGTTTCAGT TTCCTTACAA CTTCCACTTT CAACAGATCA GCCTCGGGCT TGCCGGGAAG AAGCCAATGT TAGGCGAGCT GAATTACTGC GTCAGCCTTG AACTTCCAAC CACTTCCAGG TACGGCAGTG ACTATGGAAA AGTGCAGCAC TCCAGTGCCA TCGCACAGGT GCTGATGAGC GGAGCAGGCC CAGAGCAACA GGCAATCGTG ATTGAACCTG CCTTATCCAG TCTGGCAAAC GCAGACACGT CAGCAGACCT GACCCGTCAG TTCTTCAAAA CGAAATACAA CGTCGATTAC GTCGACGACG CCAGCAATCC TTTGAATAAT CTGAACGTCT TCCTGGAGAA GACGGGTCTG GACAGTGACG GAGTCGAAGC CCTGCTTGCC ATAGGCAACC ACACGGCCTA TGCCTCTCCC AACATCCGTT CAGCGGGAAA CACCGCAGAT GAAGACTCCC CACTCGATGC GAGCCTGACA GCAATCAAGG CCCGATTCGG AGCTGGCTAC GTCAATGGCC CGACCACTCA GCCGGCAATG GCTCTGAACA AGGATGCGTA CGGCATTGAG CGGCTGGTAA ACACCAGCGT GGACCGCTTC GACCGTCTGC AACGCATGAT CCGTCTGCAG CGCTGGACGG GCATTCCGTT TACAGCGCTG GACACGTTGG TCATGGCGGT CATTCGCTCC GAAGGCGCCG TGAACCTGCA GATGGTGCTG ACGGTAAATA CGCTACGCGC ACTGGGAACC TATCGGTATC TGAACAAACG TTACGGCCTC GCGCCTGATG AGTTTGCAGC CTTTGTTCAC CTGATGCCCG GCGAGGCAAA CGACGGACGC TTGCCGATGT TCGACCGGGT ATTCAACAAC CCGGCATTGT TCGATACTCC GCTGGTGCTG GATGGGTCGA TTCTCGACCT CGATCAGGAC AGTAGCCAGC ACGTCAAGAC TCGCGCTCAG TTGAGCCGAG CCCTGCAGTT ATCCAGCACT CATGAAGGCT TGAGGCAGCT GGCCGTCGAT GTTCGCCAAC TGATTGGCAA CGCGCCCACT GACTTCAGAC TCAATTTGAG CATGATTTCT TCGCTGTACC GCCAAGCCCG CATTGCTTCG ATGTTCGGTC TGACCGCAGC AGAATGCCGG GCATTGATCG ACCTGCTGGG CACTCTGTCT TTTCGGAAAA AGGTGGTCTC AGGTCAACTC GACGACACCG AACCGGACGT GCTCGATATC CTGATGCAAC TGGACTGGGC AGTCACGTGG CTCAAAGCGT CTGACCGAGA CATCGCTGCA CTGCGACGTC AGCTAGGCTG GGACATCACC GAAACGATAG TCACGCAGGA ACTGACTGTT CAACTTGAGC AATTGACCAA CGATGCGCGC CAGGCTGTAC TGAAGAGAGA CCAGCTGGCA TCCCTTGACT TGCCAAGCAA GGATGACCAA AACAACACCA TCAATTGGTG GACTATCCTC GATTACGACC TGATCGACGG ATTAGGGCTG GTCACGACTC AGCCGCTGCA CGAGGAACCC GCGGTCAGCA TCCGCCGCAC CCTGCATGAA CGCTTGTCCT CCATAGCCAT CGCGGAACCC CTTGCAAGCG AAGTCGAAGC CAGACTTGAA ACGTTCGTAT TGAACGGCTA CCGGAATCAA CATCGGCTGG TGGAAGGGCT GTTGCTGACC CTCACCGGTT TGCCGCCGGA CCGTTGCGAG CCGGTGATAC GCTGGGCAGG CAGCGATGCA GGCAAGTTTC TCGGTGCGTT ACTTTGGGAT GATGGCGCCA TTCAGAAGCT CTCGACGCTG ATTCGCTATT CAGAAGTCAG CCAGCAACTG GGGCTGAGCG CCCGGGCGTT ACGCACGTTT TTAATCAGTC CACGCTGGCT GCATGCAGAC TTTGGCTTCC TGCTTCCCCT TTCAATGAAC AGTCTGTATT TGCTCGACCG TTACCGCAAC TGGCGCGACA ACTGCGGTTA CCCGGAAGAA ACGCTGCTCG ATTATTTCAA GCAAGCCAAT GACACGCATC GAGACAATAC CCAATGTGCT GCGCGGCTGG CATCACTGAC AGGCTGGACG TCATCTGAAG TGCTGGCCGC AAACGCATTG CTGACCGGGT CAGATCGTAT CGTTACCAGC ATGCACGAGG TGGACTGGTT GAGCCGGATG CACAGCGCCA GTGATATGAC CGGCCTTTCG GCAAGACAAT TACTGTCGGC TACTGACCTG ACAGCGACCA GCACTGCCTC GCACTGGAAG TCAGTAGGCG AAGCCGTGAT AGCCGCCAAC CGTTAA
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Protein sequence | MTEQPFSLLR NLARTGNDTH EHGDDTLPFI NAMEKLNIHS VFDIVRRSKS AFVHELSRIS DADAALAYEN ARCYATQIVR LYRNQLLSSG RPQPVTRRTG VRSLVDIGPS FPNLFKENWD LFCKVGAIEA KDSPVAYLTS LYRFALEQLE GSVAEDSRIK LHDRRPDLKG LLIDQQSTFT PVPTLHIVNQ VLSKAINAYV DTVPGDKGKS IYQLVAEKQH PFQFPYNFHF QQISLGLAGK KPMLGELNYC VSLELPTTSR YGSDYGKVQH SSAIAQVLMS GAGPEQQAIV IEPALSSLAN ADTSADLTRQ FFKTKYNVDY VDDASNPLNN LNVFLEKTGL DSDGVEALLA IGNHTAYASP NIRSAGNTAD EDSPLDASLT AIKARFGAGY VNGPTTQPAM ALNKDAYGIE RLVNTSVDRF DRLQRMIRLQ RWTGIPFTAL DTLVMAVIRS EGAVNLQMVL TVNTLRALGT YRYLNKRYGL APDEFAAFVH LMPGEANDGR LPMFDRVFNN PALFDTPLVL DGSILDLDQD SSQHVKTRAQ LSRALQLSST HEGLRQLAVD VRQLIGNAPT DFRLNLSMIS SLYRQARIAS MFGLTAAECR ALIDLLGTLS FRKKVVSGQL DDTEPDVLDI LMQLDWAVTW LKASDRDIAA LRRQLGWDIT ETIVTQELTV QLEQLTNDAR QAVLKRDQLA SLDLPSKDDQ NNTINWWTIL DYDLIDGLGL VTTQPLHEEP AVSIRRTLHE RLSSIAIAEP LASEVEARLE TFVLNGYRNQ HRLVEGLLLT LTGLPPDRCE PVIRWAGSDA GKFLGALLWD DGAIQKLSTL IRYSEVSQQL GLSARALRTF LISPRWLHAD FGFLLPLSMN SLYLLDRYRN WRDNCGYPEE TLLDYFKQAN DTHRDNTQCA ARLASLTGWT SSEVLAANAL LTGSDRIVTS MHEVDWLSRM HSASDMTGLS ARQLLSATDL TATSTASHWK SVGEAVIAAN R
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