Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3997 |
Symbol | |
ID | 3369533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4759883 |
End bp | 4761577 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654355 |
Product | heat shock protein Hsp70 |
Protein accession | YP_237065 |
Protein GI | 66047224 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.76093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0907085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGTCG GTATTGATCT GGGCACCACC AACAGCCTGG TGGCGGTATG GCGCGACGGC AGCAGCGAGC TGGTGACCAA CGCATTGGGA GAAACACTTA CCCCCAGCGT TGTCGGGCTG GACGACGACG GGCAGATTCT GGTCGGCAAG GCAGCCCGCG AACGCCTGCA GACCCACCCG GAAAAAACCG CCGCCCTGTT CAAACGCTAC ATGGGCAGCG CCCAGGAAAT TCGCCTCGGC TCTGCTACTT ACCGCCCCGA AGAGCTGTCC TCGCTGGTGC TCAAAAGCCT GAAGGCTGAC GTCGAGCGCG CGTTTGGCGA GCCTGTTACC GAAGCGGTAA TCAGCGTCCC GGCCTATTTC AGCGACGCTC AGCGTAAAGC CACGCGTATT GCCGGTGAGC TGGCGGGGCT CAAGGTCGAG AAGCTCATCA ACGAGCCGAC AGCGGCGGCA CTGGCCTATG GACTTCACCA GAAGGAAGGC GAAACCTCGT TTCTGGTCTT CGATCTGGGT GGCGGGACCT TCGACATCTC GATCCTCGAA CTTTTCGACG GCGTGATGGA AGTACGTGCC AGCGCAGGCG ACAACTTTCT GGGGGGTGAG GATTTCGATC AGGTCATGGT CGAGCACTTT GTGAACCTGC ACCGCGATGA GCCGGACTTC CCGTCAACGG AGCTGATTGC CCCGGCCTTG CGGCGCGAAG CCGAGCGGGT GCGCAGGGCT TTGGGCCAGG ACGGGAGTGC CGACTTCGTA TTGCGTCACG CCGACAGGGA ATGGCGAAAG ACCATTACTC AAGAGCAGAT GAGCGATTTT TATGCGCCCC TGCTCAACCG CCTTCGCGCG CCGGCCGAGC GTGCGCTTCG AGACGCGCGG ATACGCGTCG CCGATCTGGA TGAGATTCTG CTGGTGGGCG GCACGACGCG CATGCCACTG ATCCGCAAGC TTGCCGCGAG CCTGTTCGGG CGCTTCCCTT CCATTGCTCT CAATCCCGAT GAAATCGTCG CTCAGGGCGC AGCGGTGCAG GCGGCACTCA AGCACCGGGA CGCAGCGCTG GAGGAGATCG TCCTCACCGA TGTGTGCCCT TACACGCTGG GGATCGAGAC CATCACGCAA GTTGGCAATC GCTATGAAAG CGGTCACTAC CTGCCCATTA TCGAACGCAA TAGCGTCGTA CCGGTCAGCC GGGTAAAAAC AGTGCAGACC GTCAGTGATG ATCAAGAGCA CGTTATGGTG CGGATCTTTC AAGGCGAAAG CCGTATGGTC AAGGACAACA TCGCCCTGGG CGAGCTCATT ATCCCGATCC CCAGGGCGAA GGCCGGCGAA GTGGCGCTGG ATGTGCGTTT TACCTATGAC AATAACGGCC TGCTGGAGGC CGACGTGATG ACACAGCTGA CCGGGGAACG TCACAAGCTG GTCATCGAAA ACAACCCTGG CGTGATGACG CCTGATGAAA TACAGGAGCG CCTTCAGGTA CTCGAAGCAC TCAAAGTCCA TCCGCGCGAA CAACAGGCCA ACACTCATCT GATCGCCAGA CTTGAACGCC TGTATCAGGA ATGCCTGGGC AGCGATCGAG AACTTATCGA TCACTGGACC ACCCAGTTCC AGCATGTGCT GGAGACGCAG GACGAGCGGC AGATCAGCGA AATTCGCAAG CAACTCAAAC AGGAAGTCGA CACGTTCGAG CAGGGCGCAA GATGA
|
Protein sequence | MIVGIDLGTT NSLVAVWRDG SSELVTNALG ETLTPSVVGL DDDGQILVGK AARERLQTHP EKTAALFKRY MGSAQEIRLG SATYRPEELS SLVLKSLKAD VERAFGEPVT EAVISVPAYF SDAQRKATRI AGELAGLKVE KLINEPTAAA LAYGLHQKEG ETSFLVFDLG GGTFDISILE LFDGVMEVRA SAGDNFLGGE DFDQVMVEHF VNLHRDEPDF PSTELIAPAL RREAERVRRA LGQDGSADFV LRHADREWRK TITQEQMSDF YAPLLNRLRA PAERALRDAR IRVADLDEIL LVGGTTRMPL IRKLAASLFG RFPSIALNPD EIVAQGAAVQ AALKHRDAAL EEIVLTDVCP YTLGIETITQ VGNRYESGHY LPIIERNSVV PVSRVKTVQT VSDDQEHVMV RIFQGESRMV KDNIALGELI IPIPRAKAGE VALDVRFTYD NNGLLEADVM TQLTGERHKL VIENNPGVMT PDEIQERLQV LEALKVHPRE QQANTHLIAR LERLYQECLG SDRELIDHWT TQFQHVLETQ DERQISEIRK QLKQEVDTFE QGAR
|
| |