| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3978 |
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| Symbol | |
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| ID | 3369513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4728595 |
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| End bp | 4730409 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637654335 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_237046 |
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| Protein GI | 66047205 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CAGCACTGCC CAATGACCTG CGCCTGGACA CCGTACGCAC GGCCTACCAG
TCCGGGCGGA TATCCCCGCG CCAGCTGATC CTGGCGCTGC GCGAAAAAGC CGCAAGGCTG
AACAGCGATT ATCAACTGTT CATCCACCTG CTCAGCCCGG CTGAACTCGA GCCTTATCTG
GCCGCACTGG ACGATCGTGA TCCCAGAGAC CTGCCGCTGT TCGGCGTGCC CTTCGCGATC
AAGGACAATA TTGATCTGGC GGCCATTCCA ACCACCGCAG CCTGCCCGGA CTACGCCTAC
ACACCCGAGC ACTCGGCAAG CGTCGTCGCG CAACTGATCG CACTGGGTGC AGTGCCCATG
GGCAAGACCA ATCTGGACCA GTTCGCCACA GGCTTGAACG GCAGCCGCTC GCCCTATGGC
GCCTGCCCCA ACAGCGTGTT GAACGAGTAC CCGTCCGGCG GCTCGAGCGC CGGCTCGTCG
CTGGCCGTGG CCCTGGGCGT CAGCAGCTTC TCGCTGGGCA CCGACACGGC GGGCTCGGGC
CGAGTGCCTG CGGCACTGAA CAACCTGGTG GGAATGAAAG CCAGCAAGGG GCTGATTTCC
ACGGCAGGCG TAGTACCCGC ATGCCGCACA CAGGATTGCG TCTCGACCTT CACCGCCACG
GCGCGGGAAG CCAGCGAGCT ATTGGCACTG ATCGCCGCCT TTGATCCGCG CGATGAGTAC
AGCCGTCGCA ACCCGCTGTG GAACGACGCC TCGGCGTTCG GCACACCTCG CCCGTTTCGC
TTCGGTGTAC CCCGCGCCGA GGACCTGCAG TTCTTTGGCT GTGCCGAGGG GCCCGGACTG
TTCAGCGCAG CCATCGACCA CCTCACCGCG CTGGGTGGCG AAGCGGTCAC GGTGGACTTG
TCACCGTTTC TCGAAGCGGC GCGGTTGTTG TACGAGGGGC CGTGGGTGGC GGAACGCTAC
AGCGTCGCCG GGCAGTTGAT GGAAGAACGC CCTGACGCGG TATTGCCGGT GATCCGCGAC
GTGCTGGCCA AAGCCCCCCA GGTCAGCGGA GTCGATACGT TTCGCGCGCA ATACCGCCTG
CAAGCACTCA AGGCGACGTG CGATCGGGCG CTTGAAGGGC TGGAGTGCGT AGTAACGCCA
AGCATCGGCC GCCCGGTGAC ATCCGCAGAG CTGGCGGCCG AGCCGGTGTT GCGCAATTCG
GAGCTGGGTT ACTACACGAA TTTCGTCAAC CTGCTCGACT ACGCCGCCGT CGCCGTGCCC
AGCACGTTCA TGAGCAATGG TCTGCCGTGG GGCGTGACGC TGTTCGGACG AGCGTTCACC
GATCAGTACC TGCTCAGCCT GGCCGACGCC TTGCAGCGGC AAACCGGCCT GCCCTTGATT
GGCGGCGAAG CACCTCGACT GCCTGCGCCG CAGAGCACTG CGCGCAACGA TATGGCGCGG
TTGGTGGTCT GCGGTGCCCA TCTGGACGGA CTGGCGTTGA ACTGGCAGCT CAGGCAACGC
GGGGCACGCC TGCTGGAAAC CACGCAAAGC TCGGCCGACT ATCGGCTGTA TGCGCTGGCC
GGTGGTCCGC CGTTTCGGCC CGGCATGGTG CGGGTGGCCG AACAGGGCGT GGCCATCGAC
GTGGAGGTCT GGGAGTTGCC AAGTGTCGAG CTGGGATCGT TCCTGACCGG CATTCCGGCA
CCGCTCGGGC TGGGCAAGGT GCAATTGGCC GACGGCCGCT GGGAGACCGG TTTCATCTGC
GAAGCCTATG GCCTGGAGGG TGCCCGCGAT ATCAGCCAGC TCGGCGGCTG GCGTGCGCAC
CTGCAACAGC AGTAA
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| Protein sequence | MNDTALPNDL RLDTVRTAYQ SGRISPRQLI LALREKAARL NSDYQLFIHL LSPAELEPYL
AALDDRDPRD LPLFGVPFAI KDNIDLAAIP TTAACPDYAY TPEHSASVVA QLIALGAVPM
GKTNLDQFAT GLNGSRSPYG ACPNSVLNEY PSGGSSAGSS LAVALGVSSF SLGTDTAGSG
RVPAALNNLV GMKASKGLIS TAGVVPACRT QDCVSTFTAT AREASELLAL IAAFDPRDEY
SRRNPLWNDA SAFGTPRPFR FGVPRAEDLQ FFGCAEGPGL FSAAIDHLTA LGGEAVTVDL
SPFLEAARLL YEGPWVAERY SVAGQLMEER PDAVLPVIRD VLAKAPQVSG VDTFRAQYRL
QALKATCDRA LEGLECVVTP SIGRPVTSAE LAAEPVLRNS ELGYYTNFVN LLDYAAVAVP
STFMSNGLPW GVTLFGRAFT DQYLLSLADA LQRQTGLPLI GGEAPRLPAP QSTARNDMAR
LVVCGAHLDG LALNWQLRQR GARLLETTQS SADYRLYALA GGPPFRPGMV RVAEQGVAID
VEVWELPSVE LGSFLTGIPA PLGLGKVQLA DGRWETGFIC EAYGLEGARD ISQLGGWRAH
LQQQ
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