| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3977 |
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| Symbol | |
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| ID | 3369512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4724093 |
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| End bp | 4728559 |
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| Gene Length | 4467 bp |
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| Protein Length | 1488 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654334 |
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| Product | Urea amidolyase-related protein |
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| Protein accession | YP_237045 |
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| Protein GI | 66047204 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACA AACTGCTGAT CGCCAACCGT GGCGCCATTG CCTGCCGCAT CCTGCGGACC
CTGCGCACCT TGCAGGTCAA GGGCGTGGCG GTGTATTCCG AAGCCGACGC TGCCAGCCTG
CACCTGATGC AGGCCGACGA AGCCCACAGC CTGGGCGAAG GTGGCGCAGC CGGAACCTAT
CTGGCGGTGG ACAAGATCCT CGCCATCGCC AACGCCAGCG GCACCAAAGC CATTCATCCC
GGCTACGGTT TTCTCTCCGA AAACGCTGCA TTCGCTCAGG CCTGCGAAGA CGCCGGTATC
GCCTTCGTCG GCCCGACGCC CGAGCAACTG CGCGTATTCG GCCTCAAGCA CACCGCCCGA
GCGTTGGCCA AGCAGCATGG CGTGCCCATG CTCGAGGGTA CTGAACTGCT CGACAGTCTG
GAGTCGGCCA TCGCGGCAGC CCGCACCATC GGCTACCCGG TGATGCTCAA GAGCACGGCA
GGCGGTGGCG GCATCGGCAT GCGTGTGTGT CGCAGTGCCG GAGAGCTGGC TGACTCGTTC
GAGGCGGTCA AGCGCCTCGG TCAGAACAAT TTCAGCGATG CGGGTGTGTT CATCGAGAAA
TACATCCAGC GCGCCCGCCA CCTGGAAGTG CAGGTGTTCG GCGACGGTCA GGGCGAGGTG
CTGGCGCTTG GCGTACGCGA CTGCTCGGTG CAGCGGCGCA ATCAGAAAGT GCTGGAAGAA
ACCCCGGCCC CGAACCTGCC GCACGGCATG GCCGAAGAAC TCTGCGCAGC GGCTGTCAAA
CTCGCCAGGG CAGTCAATTA TCGCAGCGCC GGGACGGTCG AGTTCGTCTT CGACAGTGAA
GATCAGCGCT TCTATTTTCT GGAAGTGAAC ACACGCTTGC AGGTCGAGCA CGGCGTCACC
GAGCAGGTCT GGGGCGTGGA TCTGGTCAGC TGGATGGTGC AACTGGCCGC CGGTGATCTG
CCGCCGCTGG ATCAGTTGCA GGCCGGTCTG AAACCGCTTG GTCATGCGAT TCAGGCGCGG
CTGTACGCGG AAGATCCGGG CCGTGACTTC CAGCCCTGCC CTGGCCTGCT GACTGCGGCT
GATTTCCCGC CTGCCGATGG CCGGACGCTG CGCATCGACA CCTGGGTCGA AGCCGGTTGC
GAGATACCGC CGTACTTCGA CCCGATGATC GCCAAGCTGA TCAGTTGGGC ACCGACCCGC
GAGGACGCCA GCGCCGGGCT GATCGACGCG CTGAACGAAA CGCGTCTGTA CGGTGTGGAA
ACCAATCGCG ACTACTTGCG CCAGATCATT GCCGACGCGC CGTTCGCCAG TGGCCAGCCA
TGGACCCGCT GTCTGGAAGA TCTGGTGTAT CGCGCTGACA CCTTCGAAGT GCTGAGCGGC
GGCACTCAGA CCAGCGTTCA GGATTACCCG GGACGACTGG GCTACTGGGC GGTCGGTGTA
CCGCCATCCG GGCCGATGGA CAGCCGCGCG TTGCGCCAAG GCAATGAGCT GCTGGGCAAC
CCCGAAGGAT GCGCTGCGCT GGAAATCACT ATGAGCGGGC CGCTACTGCG TTTCAACACC
GATGCGGTGG TCGCAGTGAC CGGTGCGCAC ATCCCGATCA CCCTCGATGG CCAATCCTGT
GCGATGAACA CCGCGCTATT GGTGAGCGCC GGTTCGACGT TGTCGCTGGG CACCATCGCA
GGTGCCGGTG TACGCAGCTA CCTGTGCGTG CGCGGCGGGC TCGACGTGCC GGATTATCTG
GGCAGCAAAA GTACCTTTAC CCTCGGCCAG TTCGGCGGTC ATGGCGGTCG CGCGCTGCGC
GCCGGCGATG TGCTGCACAT CGCGCCCCTG GTGGATCGCC GTGCAGGGCA GCGGATTGCC
GACGAGGCAC TTGAAGCGCT GACAGACGTG CGCCGGATGA GGGTCATTTA CGGCCCGCAT
GCGGCCCCGG AATACTTCAC CGAAGCGTAC ATCGAGAGGT TTTTCGCGAC CGACTGGGAA
GTGCATTTCA ACTCCAGCCG CACCGGCGTG CGCCTGATCG GCCCAAAACC CGAATGGGTG
CGCGCCGACG GTGGCGAGGC GGGGTTGCAC CCTTCCAACA TTCACGACAA CCCGTATGCG
ATCGGCGCGG TGGATTTCAC CGGTGACATG CCGGTAATCC TCGGGCCGGA CGGACCCAGC
CTGGGCGGAT TCGTCTGCCC GGTGACCATC ATCGAGGCAG ACCTGTGGCA GCTGGGGCAA
TTGAAAGCTG GCGACAGGGT CCGATTCACC CCTGTCAGTG TCGAGGCGTG TCATGCAGAA
CGATGTGGGA GCGAGCTTGC TCGCGAAGAC AGTATTCCTG ACGCAGAAAA TCCATCGACT
GTGCCGCCCT CTTCGCGAGC AAGCTCGCTC CCACAAGGCA CCGCAAACTC CAGTAGGAAC
GAACTTGTTC GCGAAGGCAG TATTCCTGAC GCAGCAAATC CATCGACTGC AACGCCCTCT
TCGCGAGCAA GCTCGCTCCC ACAAGGCACC GCGCGCCTTC AAGGCATCGC AAACTCCCGT
AGGAGCGAAC TTGTTCGCGA AAACAGTATT CCTGACGCAG AAACCCCATC GACTGTGCCG
ACTTCTTCGC GAGCAAGCCA GCTTCCACAA GGCCCGGCAA ACTCCCGTGG GAGCAAGCTT
GCTCGCGAAA GCTATATGCC TGACGCAGAA AATCCATCGA CTGCAACGCC CTCTTCGCGA
GCAAGCTCGC TCCCACAAGG CCCCGCAAAC GCCCGTAGGA GCGAACTTGT TCGCGAAAAC
AGTATGCCTG ACGCAGAAAA TCCATTGACT GCACCGCCAT CTTCGCGAGC AAGCTCGCTC
CCACAAGACT CCGCGAACTC CCGTAGGAGC GAGCTTGCTC GCGAAGGCTA TATGCCTGAC
GCAGAAAATC CATTGACTAC ACCTCCCTCT TCGCGAGCAA GCCAGCTTCC ACAAGGCCCG
GCAAACTCCC GTGGGAGCGA GCTTGCTCGC GAAGGCTATA TTCCTGACGC AGAAAATCCA
TTGACTGCAC CGCCATCTTC GCGAGCAAGC TCGCTCCCAC AAGGCACCGC GCGCCTTCAA
GGCATCGCAA ACTCCCGTAG GAGCGAACTT GTTCGCGAAG GCAGTATTCC TGACGCGGAA
AATCCATCGA CTGCAACGCC CTCTTCGCGA GCAAGCTCGC TCCCACAAGG CCCCGCAAAC
TCCAGTAGGA GCGAAGTTGT TCGCGTAGAG GATCTGCGCA CTCCGGTCAT CCTCGACATC
GGCCAGGACG ATAAACGCCT GGTCGCACGT CTGTCCGGCG ATACCCATCT GCTGCTGGAA
ATCGGTGCGC CGGAGCTGGA TCTGGTGCTG CGCCTGCGTG GCCACGCACT GATGCTTGCG
CTGGAGGCCA AGGCGCTGGC GGGTGTGATC GACCTGACGC CAGGCATTCG CTCGCTGCAA
GTCCACTATC GCCCCGAGCA GCTGCCGCTT CGGCAACTGC TCGACATCGT CGCCGGAGAA
TGGGACGCGG TGTGCGCCGC GAAAGACCTG CAAGTGGCGT CGCGCATCGT CCATCTGCCA
CTGTCCTGGG ACGACCCGGC CTGCCAGCTG GCCATCGAAA AATACATGAC CACCGTGCGC
AAGGACGCAC CGTGGTGCCC AAGCAACCTG GAGTTCATCC GCCGTATCAA TGACCTGCCC
AACCTCGACG AAGTGCAACG TACGGTGTTC GACGCCAGTT ATCTGGTCAT GGGCCTGGGC
GATGTGTACC TCGGCGCACC GGTGGCCACG CCGCTGGACC CGCGCCACCG GCTGGTCACC
ACCAAGTACA ACCCGGCACG CACCTGGACC GCCGAGAATT CGGTGGGCAT CGGCGGCGCC
TACATGTGCG TGTATGGCAT GGAAGGCCCC GGCGGTTATC AGTTCGTTGG CCGCACGTTG
CAGATGTGGA ATCGCTATCG CGACGTCGCC GCCTTCCAGG GCAAACCATG GCTGTTGCGC
TTCTTCGATC AGATCCGTTT CTACCCGGTC AGCGCCGAAG AACTGGTGCG TATCCGCCGC
GACTTCCCGC TGGGTCGCTT CGCCCTGAAC ATCGAACACA GCACCCTGAA TCTGGCTGAT
TACCAGGCCT TCCTGAGCCG CGAAGCCGAA GGCATTACGG CATTCCGCGC CCAGCAAAAC
GCCGCTTTCA ACGCCGAGCG CGAACGCTGG ATCGCCAACG GGCAGGCCGA TTTCCAGAGC
GATGAAGGCG TGGCGCCGAA CACTGAAGAA CAGCCCCTGC AACCCGGCCA GCAAGGCGTC
GACAGCCACA TCGCCGGCAA TCTCTGGCAA GTCCAGGTGC AACCGGGAGC GCGCGTGGAA
GCAGGCGATG TGCTGGTGAT TCTGGAGTCC ATGAAAATGG AAATCCCCCT GCTCGCCCCG
ATCGCCGGCG TGGTGCAGGA CGTCAGGGTG CAACCCGGCT CGGCAGTACG CGCAGGGCAA
CGGGTGGTGG TGCTGAGCGC AGACTGA
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| Protein sequence | MFDKLLIANR GAIACRILRT LRTLQVKGVA VYSEADAASL HLMQADEAHS LGEGGAAGTY
LAVDKILAIA NASGTKAIHP GYGFLSENAA FAQACEDAGI AFVGPTPEQL RVFGLKHTAR
ALAKQHGVPM LEGTELLDSL ESAIAAARTI GYPVMLKSTA GGGGIGMRVC RSAGELADSF
EAVKRLGQNN FSDAGVFIEK YIQRARHLEV QVFGDGQGEV LALGVRDCSV QRRNQKVLEE
TPAPNLPHGM AEELCAAAVK LARAVNYRSA GTVEFVFDSE DQRFYFLEVN TRLQVEHGVT
EQVWGVDLVS WMVQLAAGDL PPLDQLQAGL KPLGHAIQAR LYAEDPGRDF QPCPGLLTAA
DFPPADGRTL RIDTWVEAGC EIPPYFDPMI AKLISWAPTR EDASAGLIDA LNETRLYGVE
TNRDYLRQII ADAPFASGQP WTRCLEDLVY RADTFEVLSG GTQTSVQDYP GRLGYWAVGV
PPSGPMDSRA LRQGNELLGN PEGCAALEIT MSGPLLRFNT DAVVAVTGAH IPITLDGQSC
AMNTALLVSA GSTLSLGTIA GAGVRSYLCV RGGLDVPDYL GSKSTFTLGQ FGGHGGRALR
AGDVLHIAPL VDRRAGQRIA DEALEALTDV RRMRVIYGPH AAPEYFTEAY IERFFATDWE
VHFNSSRTGV RLIGPKPEWV RADGGEAGLH PSNIHDNPYA IGAVDFTGDM PVILGPDGPS
LGGFVCPVTI IEADLWQLGQ LKAGDRVRFT PVSVEACHAE RCGSELARED SIPDAENPST
VPPSSRASSL PQGTANSSRN ELVREGSIPD AANPSTATPS SRASSLPQGT ARLQGIANSR
RSELVRENSI PDAETPSTVP TSSRASQLPQ GPANSRGSKL ARESYMPDAE NPSTATPSSR
ASSLPQGPAN ARRSELVREN SMPDAENPLT APPSSRASSL PQDSANSRRS ELAREGYMPD
AENPLTTPPS SRASQLPQGP ANSRGSELAR EGYIPDAENP LTAPPSSRAS SLPQGTARLQ
GIANSRRSEL VREGSIPDAE NPSTATPSSR ASSLPQGPAN SSRSEVVRVE DLRTPVILDI
GQDDKRLVAR LSGDTHLLLE IGAPELDLVL RLRGHALMLA LEAKALAGVI DLTPGIRSLQ
VHYRPEQLPL RQLLDIVAGE WDAVCAAKDL QVASRIVHLP LSWDDPACQL AIEKYMTTVR
KDAPWCPSNL EFIRRINDLP NLDEVQRTVF DASYLVMGLG DVYLGAPVAT PLDPRHRLVT
TKYNPARTWT AENSVGIGGA YMCVYGMEGP GGYQFVGRTL QMWNRYRDVA AFQGKPWLLR
FFDQIRFYPV SAEELVRIRR DFPLGRFALN IEHSTLNLAD YQAFLSREAE GITAFRAQQN
AAFNAERERW IANGQADFQS DEGVAPNTEE QPLQPGQQGV DSHIAGNLWQ VQVQPGARVE
AGDVLVILES MKMEIPLLAP IAGVVQDVRV QPGSAVRAGQ RVVVLSAD
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