Gene Psyr_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3957 
Symbol 
ID3369492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4705394 
End bp4705984 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content60% 
IMG OID637654314 
Productanti sigma-E protein RseA, N-terminal:anti sigma-E protein RseA, C-terminal 
Protein accessionYP_237025 
Protein GI66047184 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.195808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG AAGCCCTGCA GGAATCGCTG TCCGCGGTAC TGGATAACGA AGCGGACGAA 
CTGGAATTAC GTCGGGTATT GAATGCCATT GACGATGCCG ATACTCGCGC CACCTGGTCG
CGTTACCAAG TTGCTCGTGC AGCGATGCAC AAAGAGCTGC TGGTGCCTCA TCTGGATATC
TCGGCTGCTG TGTCTGCCGC GATCGCCGAT GAAGTCAGCC CGCTCAAGGC AGCTCGCGGT
CCTTGGCGTA CGCTGGGTCG TCTGGCCGTT GCAGCGTCGG TTACCGTAGC CGTTCTGGCT
GGTGTCCGCC TGTACAACCA GGATGACATT GCCGGTGCAC AACTGGCACA GCAGACCCAA
CAGCCTGCCA ACCTGACTGT TCCGCAAGTC AAAGGCCCGG CCGTACTGGC TGGTTACACT
GAAAGCGCCG AGCAAGCGCC TGGTCCTATG GCCAATGGTG TGTTGCAGGG CGGTGGTCAA
GGTGACCAGC GTCTGCCGGG CTATCTGCGC CAGCACGCCC AGGAAGCAGC GTTGAAAGGT
ACTGAAAGCG CGCTGCCATA CGCACGTGCT GCGAGCCTGG AAAACCGTTA A
 
Protein sequence
MSREALQESL SAVLDNEADE LELRRVLNAI DDADTRATWS RYQVARAAMH KELLVPHLDI 
SAAVSAAIAD EVSPLKAARG PWRTLGRLAV AASVTVAVLA GVRLYNQDDI AGAQLAQQTQ
QPANLTVPQV KGPAVLAGYT ESAEQAPGPM ANGVLQGGGQ GDQRLPGYLR QHAQEAALKG
TESALPYARA ASLENR