Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3866 |
Symbol | |
ID | 3369401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4606530 |
End bp | 4607021 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637654223 |
Product | hypothetical protein |
Protein accession | YP_236934 |
Protein GI | 66047093 |
COG category | [S] Function unknown |
COG ID | [COG5608] Conserved secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.10342 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTC AGGCGCACAT TACAAGAATC ATAAGCCTTG CGTTGATCCT GTTCGGGCTC AGCGGATGCT CGCTCCTGAG CTTTGACCGC GCTCAGGAAC CGGAAGTGCA TTTGCTGAAG GTCCAGGTGG TCAAGGCGAG GCTGACACAG CAGGATTTCA AGCTGTACTT CGAAGTTGAT AACCCCAACG AAGACAGCTT GCTGGTGCGT GGCCTGAAGT ACAAGATCAC CCTCAATGAC ATGGTCCTTG TCGATGACAC GTTCAGCGAC TGGTTTGTCG TCGACGGTAA TAGCCGCAAA ACCTTCGTGG TGCCGATTCG CACCAACCTC TGGCGCTACG CACGGTACAT CGCTCAACTG CTGAAAAAAC CTGATGAGCT GATCCATTAT CAGCTGGACG GCAAGCTCAA GACCGGAATC GTGTTCAGGC ACAACGTCCG CGTCGGCACA TCAGGCGATG TGCTGCCGCA AGACCTGATC CAGCGCCGAT GA
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Protein sequence | MSFQAHITRI ISLALILFGL SGCSLLSFDR AQEPEVHLLK VQVVKARLTQ QDFKLYFEVD NPNEDSLLVR GLKYKITLND MVLVDDTFSD WFVVDGNSRK TFVVPIRTNL WRYARYIAQL LKKPDELIHY QLDGKLKTGI VFRHNVRVGT SGDVLPQDLI QRR
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