Gene Psyr_3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3654 
Symbol 
ID3369189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4339521 
End bp4340303 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID637654013 
Producthypothetical protein 
Protein accessionYP_236724 
Protein GI66046883 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGATG CTTTCGATAG AACCGGTCCG CTCATGGAAG CCAGCAGTTA TCCGGCCTGG 
GCGCAGCAGT TGATCAAGGA TTGCAGCGCT GCAAAAGCAC GGGTGGTCGA GCACGAGTTG
TACCAGCAGA TGCGTGACGC GACGCTGAGT CCGCAGATCA TGCGCCACTA CCTGATCGGC
GGATGGCCAG TCGTCGAACA ATTCGCGGTG TACATGGCCA AGAACCTCAC CAAGACCCGT
TTCGGTCGTC ACCCGGGTGA AGACATGGCG CGCCGCTGGC TGATGCGCAA TATTCGCGTC
GAACTCAATC ATGCCGACTA CTGGGTCAAC TGGTGTGCGG CGCATGAGGT GACGCTTGAG
GACTTGCACG ATCAGCGGGT AGCGCCCGAG TTGCACGCGC TGAGCCACTG GTGCTGGCAG
ACCAGCTCGT CGGATTCGCT GGCCGTGGCG ATGGCGGCTA CCAACTACGC TATTGAAGGG
GCGACGGGCG AATGGTCGGC CGTGGTCTGT TCCACTGGTG CGTACGCTGA AGCGTTTCCT
GAAGAGACCC GCAAGAAGGC CATGAAGTGG CTCAAGATGC ATGCGCAATA CGACGACGCT
CACCCTTGGG AGGCGCTCGA GATCATTTGT ACGTTGGTGG GCAACAAGCC GAGTGTGCAA
TTGCAGACCG AGCTGCGTCA GGCCGTTACC AAAAGCTACG ACTACATGTA CCTGTTTCTT
GAGCGTTGCA TGCAACTGGA CAGGGTCAAG CCGCGAGGAC GTGTTGCCGC GCTGGAGGCG
TAG
 
Protein sequence
MIDAFDRTGP LMEASSYPAW AQQLIKDCSA AKARVVEHEL YQQMRDATLS PQIMRHYLIG 
GWPVVEQFAV YMAKNLTKTR FGRHPGEDMA RRWLMRNIRV ELNHADYWVN WCAAHEVTLE
DLHDQRVAPE LHALSHWCWQ TSSSDSLAVA MAATNYAIEG ATGEWSAVVC STGAYAEAFP
EETRKKAMKW LKMHAQYDDA HPWEALEIIC TLVGNKPSVQ LQTELRQAVT KSYDYMYLFL
ERCMQLDRVK PRGRVAALEA