Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3602 |
Symbol | |
ID | 3369133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4283061 |
End bp | 4284644 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637653957 |
Product | rhodanese-like protein |
Protein accession | YP_236672 |
Protein GI | 66046831 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.717675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.234562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACAC CTGCCACCCG ATCATTCGCC GACATTCGCC AGGCCTTGCT GGACCGTCAG GAGCTGGCCC TGGTAGACGT CCGCGAAGAG GCTCCCTTTG CCCAGGCTCA TCCGCTGTTT GCCGTGAACA TCCCGTTGTC GAAGCTGGAG CTGGAGGTTT TCTCCCGCAT CCCGCGACGC GACACGGCCG TGACCCTGTA CGACGATGGC GAAGGCTTGG CCCAGATCGC CCTGCAACGC CTGCAGACAC TGGGCTACAG CGACGTGAAA CTGCTCGACG GCGGCCTGCA GGGCTGGCGC GCGGCTGGCG GCGAGCTGTT CATCGACGTG AATGTGCCGA GCAAGGCGTT TGGCGAGCTG GTGGAGCATC ACCGCGCCAC CCCGTCGCTG GCCGCAGAAG AGGTCAAGCG CCTGCTCGAC AGCAATGCCG ACGTGGTGGT GCTCGATGCC CGGCGCTATG ACGAATACCA GACCATGAGC ATTCCCGGCG GCATCAGCGT GCCGGGTGCC GAACTGGTGC TGCGGGCACG TGAGCTGGCA CCGGATCCCA CTACTCGAAT CATCGTCAAT TGTGCCGGTC GCACGCGCAG CATCATCGGC ACCCAGTCGC TGGTCAACGC GGGTCTGCCC AACCCGATCA ACGCACTGCG CAACGGCACC ATTGGCTGGC TGCTGGCCGG CCAGACGCTG GACCATGGCC AGAACCGGCG TTTTGCGGCA GTCAGTGAAG AGACCCGCGA AACCGCCAGT GCCGATGCCC GCAAGGTGGC CGATCGCGCC AGCGTCAAAC GTGCCAGCCG TGCCGATCTG CAACGCTGGC AAGCCGGGGC TTCACGCACC ACTTACCTGT TCGATGTACG CACCCCGGAA GAGTTTGCCA AAGGCCACCT GCCCGGCGCG CGCTCTACAC CGGGCGGGCA ACTGGTGCAG GAAACCGATC ATTTCGCCAG CGTACGCGGT GCGCGAATCG CTCTGCTGGA CGACGACGGC GTACGCGCCA ACATGTCGGC CTCCTGGCTG GCACAGTTGG GCTGGGACGT GGCGGTGATC GATGACCTGG ATGCGGCCGA CTTCAGCGAA CAGGGCGACT GGGACGCGCC CTTCCCGACG CCGCCGCAGG TGGAGGCGAT CAGCGTCGAG ACTCTCACCC AGTGGCAGAC ACAGGTAAAG GTGGCGGTGC TGGATTTCAC TGCCAGCGCC AACTATGTCA AACAGCATAT TCCCGGCGCC TGGTGGACGT TGCGTGCCGA CCTGAAACAG GCGCTGCACA AGCTGCCGGC TGCTGACCGC TATGTCTTGA CCTGCGGCAG CAGCCGTCTG GCGCGCTTTG CCGTAGCCGA CCTCGAAGCG TTGACCGACA AGCCGGTGTT CCTCCTCGAA GGCGGCACCG CCAGCTGGAT CAAGGCAGGT CTGCCGCTGG AGCACGGCGA AAGCCGACTG GCCTCGCCAC GCATCGATCG CTATCGCCGC CCCTATGAAG GCACCGATGC TCCGCGTGAA GCCATGCAAG CCTACCTGAA CTGGGAGTTC GGGCTGGTCG AGCAGTTGGG ACGTGACGGG ACACATGGGT TTTACGTGAT TTGA
|
Protein sequence | MTTPATRSFA DIRQALLDRQ ELALVDVREE APFAQAHPLF AVNIPLSKLE LEVFSRIPRR DTAVTLYDDG EGLAQIALQR LQTLGYSDVK LLDGGLQGWR AAGGELFIDV NVPSKAFGEL VEHHRATPSL AAEEVKRLLD SNADVVVLDA RRYDEYQTMS IPGGISVPGA ELVLRARELA PDPTTRIIVN CAGRTRSIIG TQSLVNAGLP NPINALRNGT IGWLLAGQTL DHGQNRRFAA VSEETRETAS ADARKVADRA SVKRASRADL QRWQAGASRT TYLFDVRTPE EFAKGHLPGA RSTPGGQLVQ ETDHFASVRG ARIALLDDDG VRANMSASWL AQLGWDVAVI DDLDAADFSE QGDWDAPFPT PPQVEAISVE TLTQWQTQVK VAVLDFTASA NYVKQHIPGA WWTLRADLKQ ALHKLPAADR YVLTCGSSRL ARFAVADLEA LTDKPVFLLE GGTASWIKAG LPLEHGESRL ASPRIDRYRR PYEGTDAPRE AMQAYLNWEF GLVEQLGRDG THGFYVI
|
| |