Gene Psyr_3526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3526 
Symbol 
ID3369053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4202856 
End bp4203761 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID637653877 
Productregulatory protein, LysR:LysR, substrate-binding 
Protein accessionYP_236596 
Protein GI66046755 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.33739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.82105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG TTCAAGATCG ACGCATCCTG TACTTTTTCG AAGCCGTACG ATTGGGTAGC 
GTCCGGGCTG CCGCCGACTT CCTCAACGTT GCGCCTTCGG CGGTCAGCCG CCAGATCGCG
CAACTGGAAC AGGAGCTGGG TTCCCCCCTG CTGGAGCGCC ATCGACGCGG CGTCAAACCG
ACCGAGGCGG GCGACAAGGT GCTGGCCTAT TACCGCCAGC GACTGACGCA GCAGGAGGTC
CTGCTGGATT CGATTCAGGC CCTCAAAGGC TTGCACAGCG GCTCGGTGAC GCTGGTCTCC
GGGGAGGGGT TTCTGGAAAG TCTCGCGCAG CCGCTGGCCC GGTTTTCCGA GCTGTACCCC
AGGATCGAAC TGATCGTGAA CGTCTGCGGC AGCAACGAAG TGATTCGCCA GGTGGTCGAG
GATGAAGCGC ACATCGGCCT GGTCTTCAAT CCGGCTGCCG ACCCGAAAAT CCGCTCGCAT
GCGCATCAGC GTCAACCGGT CTGTGTGATC ACCGGGCCTG ATCATCCGCT GACCGACGAA
CCAGGCCCGA TACAGCTGCG GGCACTTGAA GACTACCGTG TCGCCCTGCC TGCGGTGTCT
TACGGTATCC GCCAGATTCT GCTGCAAGCC GAGCATCAGC TGGGCATCAC CGTGCAGCCG
ACGCTGACCT GCAGCACCTT CGCGATGCTC AAGCATTTCG CCATGCAAGG GGGCGTCACG
CTGCTGCCGA CCTTTGTCGT GGAGGAAGAG ATAAAAGCCG GCACATTGCG TGCCCTGCCC
TTGCAGCATG AGGTGTTCAG CAGCCCGCAA ACCCACCTGA TCAGCCGCCT GGGCCGTCAG
CTCAGCGTTG GTGCCAACCG CCTGATGGGC ATGCTGTTGC AGGATATGAC AGCGTTCCGC
AACTGA
 
Protein sequence
MSLVQDRRIL YFFEAVRLGS VRAAADFLNV APSAVSRQIA QLEQELGSPL LERHRRGVKP 
TEAGDKVLAY YRQRLTQQEV LLDSIQALKG LHSGSVTLVS GEGFLESLAQ PLARFSELYP
RIELIVNVCG SNEVIRQVVE DEAHIGLVFN PAADPKIRSH AHQRQPVCVI TGPDHPLTDE
PGPIQLRALE DYRVALPAVS YGIRQILLQA EHQLGITVQP TLTCSTFAML KHFAMQGGVT
LLPTFVVEEE IKAGTLRALP LQHEVFSSPQ THLISRLGRQ LSVGANRLMG MLLQDMTAFR
N