| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3523 |
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| Symbol | |
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| ID | 3369050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 4199121 |
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| End bp | 4200278 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637653874 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_236593 |
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| Protein GI | 66046752 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00484515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.807548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCATTT CAAAGACGTT GATTGACGAA GCAACCGTGT GGCGCCGCAC CCTCCATGCC
GCGCCGGAAC TGGGGTTTCA GGAGCTGAAA ACCTCCGACA AGGTGGCTGA GTTGCTGAGC
GGTTTCGGCA TCGAGATTCA CCGTGGGCTG GGCGGCACTG GCGTGGTTGG CACCCTGCGT
AACGGCGACG GTCCGACCAT CGGCCTGCGT GCCGACATGG ATGCCTTGCC GATTCAGGAG
CTGGGCGACA GCGTTCACAA GTCGACCCAC AAGGGCTGCA TGCACGCCTG CGGCCATGAT
GGCCACACCG CGATCCTGCT GGCCACCGCG AGGCATCTGG CCGAGACTCG GCGCTTTCGC
GGCACGGTGC ATTTCGTCTT CCAGCCTGCC GAAGAGAACC TCGGCGGCGC ACAGCGAATG
ATCGAAGACG GACTGTTCGA ACGCTTTCCG ATGGAAGCCA TCTACGGCCT GCACAACTGG
CCGGGTGTGC CTGCGGGCAA GGTGGTGATC AATCCGGGGC CGATGATGGC GTCGCTCGAC
ACCTTTGAAA TCACCCTGAC CGGCAAAGGC AGCCATGCGG CCATGCCGGA CAAGGGCAAT
GATCCGATCG TGGCCGCGGC CGAGCTGGTG CTGGGGCTGC AAACCATTGT CTCCCGGCGC
CTGTCGCCGC TCGATTCGGC GGTGGTCAGC ATCACTCAGT TCAATGCCGG CGAGGCGATC
AACGTGATCC CGGAAACCGC CACGTTGCGT GGCACCGTGC GCTGCCTGCA AACCCCTGTG
CGCGAAAAGG TTCAGCAACT GATCGGCGAG TTCGTCGAGC GTTTGCCGAC GGCCTTCGGC
GTGCGCGGCG AGCTGGTTTA CAACGTCGGC TACCCGGTGA CCGAAAACCA CGTCGAAGCG
GCTGCCACGA TCCGTCGTGC AGCAGTCGCC GCAGTCGGCG AGGCCAACGT GCAGTGGGGC
TGCAACCCGT CGATGGCCTC TGAAGACTTC GCCTTCATGC TGCATGCATG TCCCGGTGCT
TACATCTGGA TGGGCGTCGA CGGCGAGAAG CCGTCAGCGG CGTTGCACAA CCCTTACTAC
GACTTCAACG ACCAGGTGAT CGAACCCGGC GTTGCGGTCT GGACCTCGCT GGTGGAGCAG
TGTTTGCCGG TGGCTTGA
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| Protein sequence | MSISKTLIDE ATVWRRTLHA APELGFQELK TSDKVAELLS GFGIEIHRGL GGTGVVGTLR
NGDGPTIGLR ADMDALPIQE LGDSVHKSTH KGCMHACGHD GHTAILLATA RHLAETRRFR
GTVHFVFQPA EENLGGAQRM IEDGLFERFP MEAIYGLHNW PGVPAGKVVI NPGPMMASLD
TFEITLTGKG SHAAMPDKGN DPIVAAAELV LGLQTIVSRR LSPLDSAVVS ITQFNAGEAI
NVIPETATLR GTVRCLQTPV REKVQQLIGE FVERLPTAFG VRGELVYNVG YPVTENHVEA
AATIRRAAVA AVGEANVQWG CNPSMASEDF AFMLHACPGA YIWMGVDGEK PSAALHNPYY
DFNDQVIEPG VAVWTSLVEQ CLPVA
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