Gene Psyr_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3490 
Symbol 
ID3369017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4158573 
End bp4159319 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content58% 
IMG OID637653841 
Producthypothetical protein 
Protein accessionYP_236560 
Protein GI66046719 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.291919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGGCT CAAGCGCGGA CGATGCTCCG CAGCCCCCGA AGGTTCTCAA TACACCTTTG 
GAAATTGCCG CTAACCTGCG GCTGCTACTC GAGAGTCATG ATCCTCTGAT CATTACCTTT
CACGAGCGTC CCCAGCGCTT TCAGAGTTAT CTGCTTGAAG TCGACCGTGA CAACAACGTC
ATGGCCCTCG ACGAAATGAT CCCCCGCGAT GGCGAACGCT TTCTGAGCAA CGGCGAATCC
TTCCGTGTCG AAGGCTTTCA TGATGGCGTG CGGATTGCCT GGGAAAGTAC TGCGCAGATG
GACATCCTCA GCACCGACGG TCAACGCATG TACCGCGGCC CGATGCCTGA GGAAGTGGTT
TATCACCAGC GCCGCAACGC CTTCCGGGCC GCGCTGAAGC TGGCGCAACT GGTCGACGTC
GAAATCGGCG GTGACCGCCT GAAATTCACG CTGGCCGGCA AGCTGCTGGA TATTTCTGCC
ACCGGCTGCA AGTTGCGCTT CGAGGGCGAC GTGTCCGATC GCATGCAATT GGGCCAGGTA
TACGAGCGTT TCGTTGCCAA GCTGCCTTTC GGCGCCATGA CAGCACCTGT CGAGTTGCGC
CACCTGCATT TCGAAGAACG ATTCAACACC ACCTTTGCCG GCGTGCGCTT CCACAACATG
AGTGGGCTGG TGCAGCGTCA GGTCGAACGT TTCGTCTATC AGTTACAGCG CGAAGCACGG
CGCTTCGACA AAGACGACGA CTTCTGA
 
Protein sequence
MNGSSADDAP QPPKVLNTPL EIAANLRLLL ESHDPLIITF HERPQRFQSY LLEVDRDNNV 
MALDEMIPRD GERFLSNGES FRVEGFHDGV RIAWESTAQM DILSTDGQRM YRGPMPEEVV
YHQRRNAFRA ALKLAQLVDV EIGGDRLKFT LAGKLLDISA TGCKLRFEGD VSDRMQLGQV
YERFVAKLPF GAMTAPVELR HLHFEERFNT TFAGVRFHNM SGLVQRQVER FVYQLQREAR
RFDKDDDF