Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3398 |
Symbol | |
ID | 3368925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4055262 |
End bp | 4056398 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637653749 |
Product | alanine racemase, N-terminal |
Protein accession | YP_236468 |
Protein GI | 66046627 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000409999 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCT CCCTGTCTTC TCTCGATACG CCTGTCGCGC TGCTCGACGT GTCGCGCATG CAGCACAATA TCCAGCGCAT GCAACAACGC ATGAATGAAC TGGGCGTGCG CTTGCGCCCA CACGTCAAGA CCAGCAAATG CCTGCCGGTC ATTCAGGCGC AGATTGCAGC GGGCGCCAGC GGCGTCACGG TGTCGACATT AAAGGAGGCC GAGCACTGCT TTGCCGAAGG CATCGACGAC GTGTTCTATG CCGTCGCCAT TGCACCCGGC AAGCTGGAGC AGGCACTCAG ACTGCGGCGC AAGGGCTGCC GCCTGAGCAT CCTGACCGAT AGCGTAGCGG CGGCCCGGGC GATTGCGGTT TTCGGCCAGG CGCATGACGA ACGTTTCGAC GTGTGGATTG AAATCGATTG CGACGGTCAT CGCTCCGGGC TGACCGTCGA AGACCCCTCG CTGGTCGAGG TCGCGAGCAC GCTGGTCAAC GGCGGCATGC AACTGCGTGG GGTAATGACC CATGCCGGGT CCAGTTATGA CCTCGACACC CCCGCAGCCC TGCAAGCGCT CGCCGAACAG GAACGCAGGC TGTGCGTCAG CGCCGCCGAG CGGATTCGCC AGGCAGGGCT GCCCTGTGCG GACGTCAGCA TCGGTTCGAC CCCGACGGCA CTGTCGGCGC AGAGCCTGCA CGGCGTGACC GAAGTTCGCG CCGGGGTGTA TGTGTTCTTC GATCTGGTGA TGCACAACAT TGGCGTATGC CGGGCAGATG AGCTGGCCCT GAGCGTGTTG ACCACGGTCA TCGGCCATCA GCAGGACAAG GGCTGGATCA TCGTTGACGC AGGCTGGATG GCCATGAGTC GCGACCGTGG CACTCAGCGC CAGCGTGAGG ATTTCGGCTA TGGCCAGGTG TGCAACGAAA CTGGCGAGTG GATCGACGGT GCACGGGTCA CCGGTGCCAA TCAGGAGCAC GGCATCATCA CGCTTGCTGC GGGCAGCGAG ACCGACATCA GCGAGCGTTT TCCCATCGGT AGCCGGCTGC GCATTCTGCC CAATCACGCC TGTGCCACCG GCGCGCAATT CCCCGACTAC CACGCCTGCG ACAGCGAAGG CGCAATCCAT ACCTGGAGTC GTCTGCATGG CTGGTGA
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Protein sequence | MSASLSSLDT PVALLDVSRM QHNIQRMQQR MNELGVRLRP HVKTSKCLPV IQAQIAAGAS GVTVSTLKEA EHCFAEGIDD VFYAVAIAPG KLEQALRLRR KGCRLSILTD SVAAARAIAV FGQAHDERFD VWIEIDCDGH RSGLTVEDPS LVEVASTLVN GGMQLRGVMT HAGSSYDLDT PAALQALAEQ ERRLCVSAAE RIRQAGLPCA DVSIGSTPTA LSAQSLHGVT EVRAGVYVFF DLVMHNIGVC RADELALSVL TTVIGHQQDK GWIIVDAGWM AMSRDRGTQR QREDFGYGQV CNETGEWIDG ARVTGANQEH GIITLAAGSE TDISERFPIG SRLRILPNHA CATGAQFPDY HACDSEGAIH TWSRLHGW
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