| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3390 |
|---|
| Symbol | |
|---|
| ID | 3368917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 4049062 |
|---|
| End bp | 4049238 |
|---|
| Gene Length | 177 bp |
|---|
| Protein Length | 58 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637653741 |
|---|
| Product | Heme exporter protein D (CcmD) |
|---|
| Protein accession | YP_236460 |
|---|
| Protein GI | 66046619 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3114] Heme exporter protein D |
|---|
| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.937654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTTTG CATCGTTCAG CGATTTTCTT GCCATGGGTC GCCACGGGGT ATTTGTCTGG
TCGGCCTACG GCCTGTGCCT TGTGGTGCTG CTGATCAACG TGGCGCTGCC GCTATGGGCG
CGGCAGCGCT TTCTGAAACA GCAGGCGCGT CGCCTGAAGC GGGGGAATCG CCCGTGA
|
|---|
| Protein sequence | MSFASFSDFL AMGRHGVFVW SAYGLCLVVL LINVALPLWA RQRFLKQQAR RLKRGNRP
|
|---|
| |