| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3381 |
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| Symbol | |
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| ID | 3368908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4039846 |
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| End bp | 4041279 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637653732 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_236451 |
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| Protein GI | 66046610 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.261059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG CTTTACGCGT GGCCGCTCTC GGCTTTACCG CCGTGCTGTC AGCCTGCCAG
ATGGTCGGCC CGGATTACCA GGTGCCCAAG GACGGCGCGA TCAACCGTCC GGACCTGCAG
GGTGAACTGG CTGGCCGCTC TGTCAACACG GTTTCGGCCC CGGTGCCTGC GCACTGGTGG
CGCCTGTATC AGGATGCGCG TCTGGATGAG CTGGTGCGCC AGGCTATCGC GTCCAATACC
GACCTGCGCA TTGCCGCGGC CAACCTGCAG CGTGCCCGCT ATCAGACCTC GGAAGCCGAG
GCGGCTGGCG GCTTTACCAA CGGCGCGAAG ATCGGCGCGC AGCGCGTGCA GGAGTCAGGC
GAGGCGTTTC TGCTGACCGA CAAGGTGCCG GTGGCCAATG TGGGCGACGT GGGTCTGACC
ACTTCGTACC AGTTCGATCT GTTCGGCACC TTGCAGCGTG GCATCGAAGC GGCGCAGGCC
AATGTCGATG CCAATCAGGC AGCGGTGGAT ACGGCACGCA TCACGGTGGT CGCCGATGTG
GTGCGCGCCT ACACGCAGAT TTGTGCGGCC AACGAAGAAC TCGACATCGC CCGCGCATCG
CTAGACTTGC AAAAACAGAG TGTGTCCCTC AACCAGCGCC TGCGTGATGC CGGGCGTGGC
GATGAAACGC AGGTCACTCG TTCACAGACA CAGTTCAAGT CGTTACGCGC CGAAATGCCC
CGTTACGAGG CGCGCCGTCA GGCTGCAATC TTCCGCCTGT CGATGCTGCT GGCCAAACCT
GTCGAGCAAC TGCCCGCCGG GGTAAGCACC TGCAACCAGC TGCCGCAGAT TGCGCAGGTC
ATGCCTGTTG GTGACGGCGC AGCGCTGCTC AAACGCCGCC CGGATGTGCG TCAGGCTGAA
CGCCATCTGG CGATGTCGAC TGCCGAGATC GGTGTTGCCA CCGGCGAGCT GTATCCGGAC
ATCAGCATCG GCGCGAGCAT TGGCACCACC GGCCTGATCG AGAACCTTGG CAAGCCGGCG
GCCAATCGCT GGGGCTTCGG GCCGCTGCTG AACTGGACCA TCCCGTCCAA TGGCTCACGC
GCCCGCATCC ATCAGGCCGA AGCCTCGGCG CAGGCGGCAC TGGCGCGCTT TGACGGTGTG
GTGCTCAATG CCATCCGTGA AACTCAGACC GGTCTGGCGC AATACACCGC CCTGCTCGAC
CGCCGCGACG CCCTCAAAGA AGCCGAGCAA TCCGCCAGGG AAGCGGCTGA CCAGACGCAC
CGCTTCTATC AGGCCGGACG CGCTTCGTTC CTCGCCGATC TGCAGGCCAC ACGCACTTAC
ACTGACGTGC GCGCGCAAAT GGCGGAGGCC AACACGCAGG TGGCGATGGG GCAGATCAAT
CTGTTTCTGG CACTCGGCGG CGGCTGGGAG AAGGATGACG TGGCGCAGAA ATAG
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| Protein sequence | MKPALRVAAL GFTAVLSACQ MVGPDYQVPK DGAINRPDLQ GELAGRSVNT VSAPVPAHWW
RLYQDARLDE LVRQAIASNT DLRIAAANLQ RARYQTSEAE AAGGFTNGAK IGAQRVQESG
EAFLLTDKVP VANVGDVGLT TSYQFDLFGT LQRGIEAAQA NVDANQAAVD TARITVVADV
VRAYTQICAA NEELDIARAS LDLQKQSVSL NQRLRDAGRG DETQVTRSQT QFKSLRAEMP
RYEARRQAAI FRLSMLLAKP VEQLPAGVST CNQLPQIAQV MPVGDGAALL KRRPDVRQAE
RHLAMSTAEI GVATGELYPD ISIGASIGTT GLIENLGKPA ANRWGFGPLL NWTIPSNGSR
ARIHQAEASA QAALARFDGV VLNAIRETQT GLAQYTALLD RRDALKEAEQ SAREAADQTH
RFYQAGRASF LADLQATRTY TDVRAQMAEA NTQVAMGQIN LFLALGGGWE KDDVAQK
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