Gene Psyr_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3327 
Symbol 
ID3368854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3979241 
End bp3980032 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID637653678 
Productregulatory proteins, IclR 
Protein accessionYP_236397 
Protein GI66046556 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00736955 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCAGG AAACCGAAAG CCCCGCAGGC GGACGCCAGC AGAAAGTCCA GGCCGCTGAA 
GTCGGGCTGG GCGTGCTCAA GGCACTTGCC GAACTCTCCC CTGCCACGTC CCTTTCGAGA
CTGGCCGAAC ACCTGGGCAT GCCCGCCAGC AAGGTTCATC GTTATCTGCA GGCGCTGATT
GCCAGTGGCT TTGCCGAACA GGATGCTGTC AACAATCACT ATGGGCTGGG GCGCGAGGCG
TTGCAGGTGG GGCTGGCCTC GCTCGGCAAG CTGGATGTCC TCAAGGTGTC GGCCCCCTGG
CTGGCCAGCT TGCGCGACGA GTTGAATCAG ACCTGCTTTC TGGCGGTATG GGGCAACAAG
GGCCCGACCG TGGTGTATGT CGAACCCTCG ATGGGTGCGG TGACGCTGGT CACGCAGATC
GGCTCGGTGC TGCCGCTGCT TGGCTCGTCC ACCGGCCTGG TGTTCGACAG TTTTCTGAAC
GACCGCGAAA CCGCTGCGCT TCGCGAGCAG GAAGTGCCGT TGCTGAGCGC CGCACAGTTG
CGTGAGGTCG AGCAGCATGT CGAGCAGATT CGTACCGCTG GCGTGCACCA GATTCAGGGC
TTGCTGATGC CGGGTATCAA CGCAGCCTCC TCACCGCTGT TCGCCATGGG TGACAAGCTG
GTGGGCGTGA TTACCGTGGT CGGGCCGGGA TCGGTGTTGC ACGACGCGAC ACAGGATCTG
GCGGCCACGC GGCTTTTGCA AACGGCGGTG GCGATCAGCG AGCGCATGGG CGGTAGCCGT
CCGTCAGACT GA
 
Protein sequence
MTQETESPAG GRQQKVQAAE VGLGVLKALA ELSPATSLSR LAEHLGMPAS KVHRYLQALI 
ASGFAEQDAV NNHYGLGREA LQVGLASLGK LDVLKVSAPW LASLRDELNQ TCFLAVWGNK
GPTVVYVEPS MGAVTLVTQI GSVLPLLGSS TGLVFDSFLN DRETAALREQ EVPLLSAAQL
REVEQHVEQI RTAGVHQIQG LLMPGINAAS SPLFAMGDKL VGVITVVGPG SVLHDATQDL
AATRLLQTAV AISERMGGSR PSD