Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3327 |
Symbol | |
ID | 3368854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3979241 |
End bp | 3980032 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637653678 |
Product | regulatory proteins, IclR |
Protein accession | YP_236397 |
Protein GI | 66046556 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00736955 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCAGG AAACCGAAAG CCCCGCAGGC GGACGCCAGC AGAAAGTCCA GGCCGCTGAA GTCGGGCTGG GCGTGCTCAA GGCACTTGCC GAACTCTCCC CTGCCACGTC CCTTTCGAGA CTGGCCGAAC ACCTGGGCAT GCCCGCCAGC AAGGTTCATC GTTATCTGCA GGCGCTGATT GCCAGTGGCT TTGCCGAACA GGATGCTGTC AACAATCACT ATGGGCTGGG GCGCGAGGCG TTGCAGGTGG GGCTGGCCTC GCTCGGCAAG CTGGATGTCC TCAAGGTGTC GGCCCCCTGG CTGGCCAGCT TGCGCGACGA GTTGAATCAG ACCTGCTTTC TGGCGGTATG GGGCAACAAG GGCCCGACCG TGGTGTATGT CGAACCCTCG ATGGGTGCGG TGACGCTGGT CACGCAGATC GGCTCGGTGC TGCCGCTGCT TGGCTCGTCC ACCGGCCTGG TGTTCGACAG TTTTCTGAAC GACCGCGAAA CCGCTGCGCT TCGCGAGCAG GAAGTGCCGT TGCTGAGCGC CGCACAGTTG CGTGAGGTCG AGCAGCATGT CGAGCAGATT CGTACCGCTG GCGTGCACCA GATTCAGGGC TTGCTGATGC CGGGTATCAA CGCAGCCTCC TCACCGCTGT TCGCCATGGG TGACAAGCTG GTGGGCGTGA TTACCGTGGT CGGGCCGGGA TCGGTGTTGC ACGACGCGAC ACAGGATCTG GCGGCCACGC GGCTTTTGCA AACGGCGGTG GCGATCAGCG AGCGCATGGG CGGTAGCCGT CCGTCAGACT GA
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Protein sequence | MTQETESPAG GRQQKVQAAE VGLGVLKALA ELSPATSLSR LAEHLGMPAS KVHRYLQALI ASGFAEQDAV NNHYGLGREA LQVGLASLGK LDVLKVSAPW LASLRDELNQ TCFLAVWGNK GPTVVYVEPS MGAVTLVTQI GSVLPLLGSS TGLVFDSFLN DRETAALREQ EVPLLSAAQL REVEQHVEQI RTAGVHQIQG LLMPGINAAS SPLFAMGDKL VGVITVVGPG SVLHDATQDL AATRLLQTAV AISERMGGSR PSD
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