Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3324 |
Symbol | |
ID | 3368851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3975874 |
End bp | 3976488 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637653675 |
Product | regulatory protein, TetR |
Protein accession | YP_236394 |
Protein GI | 66046553 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0882884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAC CCATGCGCCT TACCGATCAG AAACGCGAAT CCATCGTCCA GGCGGCTATT GCCGAATTCG GCGATCGTGG CTTCGAGATC ACCAGCATGG ACCGGATCGC CGCGCGGGCC AAGGTTTCCA AGCGTACGGT CTATAACCAT TTCCCCAGCA AGGAAGAACT GTTCGCCGAG ATGCTGCAGC GCCTCTGGAG CTGCGCCCCG CCGCAGGCTG AGGTGGTTTT TCGCCCGCAA ATCGGGCTGC GCGAGCAGTT GCGGGAATTG CTGTGGGGCA AGATGCGCAA CCTGACCAAC AGCCACTTTA TCGACCTGGC CCGCGTGGTG GTCGGCGCCA CCATTCACTC ACCCGAACGG GCTCAGGTGT GGATGGCGCG TATCAATGAA CGAGAAGAAA CCTTCAGTGC CTGGATTCGC GCCGCGCAGA AGGACGGCCG GCTGAAGCCG GTTGACCCGG CCTTTGCCGC GACGCAAATG CATGCATTGC TCAAGTCGTT CGCGTTCTGG CCGCAGGTGA CGTTCAGTGC TGCATTGCTT ACCCCCGAGG AGCAGCACAC GGTGGTCGAG TCGACGCTGG ACATGTTTCT CGGCTGGTAC GAAATAACCC GCTGA
|
Protein sequence | MTEPMRLTDQ KRESIVQAAI AEFGDRGFEI TSMDRIAARA KVSKRTVYNH FPSKEELFAE MLQRLWSCAP PQAEVVFRPQ IGLREQLREL LWGKMRNLTN SHFIDLARVV VGATIHSPER AQVWMARINE REETFSAWIR AAQKDGRLKP VDPAFAATQM HALLKSFAFW PQVTFSAALL TPEEQHTVVE STLDMFLGWY EITR
|
| |