Gene Psyr_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3308 
Symbol 
ID3368835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3959306 
End bp3960406 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID637653659 
Productglycosyl transferase, group 1 
Protein accessionYP_236378 
Protein GI66046537 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000927937 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.801568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG GACTCGACTA CCGCGCGGCA GCCGGTTACC CCATCAGCGG CATCGGACGC 
CAGAACCTGG CACTGGAACA GGCGTTTCGT GAACATCCGG ATGTGCAATT GCAGCTGTTC
GGCGTGGCCC CCTACGATCA TCCGGTACGC CGCGTGATGC ATGCCCCGCG CTGGGCCGCC
CCCTTGAATT CGGTGCATCG GCTACCGGAT CGCCTGCGCT TCGAAGGCCA GTTCCTGCCT
GCAGCACTGC GCGACGCCGG TATCCAGATC TACGTGGCCA ATATCAACAT GGGCCTGCCG
CTGGGGCGCA AACCGGCCGA TATACGCTAC GTATTGCAAC TGCACGATCT GTTTCAGCTC
ACGCAGCACA ACAGTCACGG TTCGCGACTC AAAGCCAGGA TCTACCGGAT GACCGACTAC
CTGTCGATTG CCTGGTCGCT GAAGGTTGCC GACCAGATCT GGGTGCCTTC GCAATTCACG
GCAAACGAAG CTGCTCGTAT GTTCCCCAGG ATCAAGGCCA AGCTGCGCGT CATACCGCTG
CTGGTGGAGG CGTTCAAGGG TGAGCCGGCC GACATCGCGC AACTGCACCT GCCGCTGCGT
TACTGGCTGT GCGTGGGCAC GCGGGAACCG CGCAAGAACA TCAAATGGTT CGTGGATGCC
TGGCAGACCG CGCGCATGCA ATTCGTCGAT ACCCCGGAAC TGGTACTGGT CGGTGGCGAC
GATCCGCTGA CCGAGGCCCA GCGCCAGTTA CCAGGTCTGC ATGTGCTCAG CGGCCTGAGC
GACGCCGAAC TGCACGCCGT CTACAAAAAT GCCGAACGGC TCTGGCAACC CTCCACAAGC
GAAGGTTTCG GGCTGCCGGT GATTGAAGCG CTGAACAGCG GCACATCGGT TGCGGTGGCC
ACGGGCTCGT CGCTGGATGA GGTCGCCCCG CCCGACAGCC CGCGCTTTTC ACCGCTCGAT
AGCGGCAATC TGATCAGGTT GATGGGCACC CTGTCGCAGG CCCCCGAAGA AGATCCGGCG
ATTGCCACAG AATGGACGCA GCGCTATCAG TTGAAAGCCT TTTGCGAGCG CGTGCACGCG
GCGCTGGAGG AATTGCGCTG A
 
Protein sequence
MRIGLDYRAA AGYPISGIGR QNLALEQAFR EHPDVQLQLF GVAPYDHPVR RVMHAPRWAA 
PLNSVHRLPD RLRFEGQFLP AALRDAGIQI YVANINMGLP LGRKPADIRY VLQLHDLFQL
TQHNSHGSRL KARIYRMTDY LSIAWSLKVA DQIWVPSQFT ANEAARMFPR IKAKLRVIPL
LVEAFKGEPA DIAQLHLPLR YWLCVGTREP RKNIKWFVDA WQTARMQFVD TPELVLVGGD
DPLTEAQRQL PGLHVLSGLS DAELHAVYKN AERLWQPSTS EGFGLPVIEA LNSGTSVAVA
TGSSLDEVAP PDSPRFSPLD SGNLIRLMGT LSQAPEEDPA IATEWTQRYQ LKAFCERVHA
ALEELR