Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3308 |
Symbol | |
ID | 3368835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 3959306 |
End bp | 3960406 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637653659 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_236378 |
Protein GI | 66046537 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000927937 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.801568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATAG GACTCGACTA CCGCGCGGCA GCCGGTTACC CCATCAGCGG CATCGGACGC CAGAACCTGG CACTGGAACA GGCGTTTCGT GAACATCCGG ATGTGCAATT GCAGCTGTTC GGCGTGGCCC CCTACGATCA TCCGGTACGC CGCGTGATGC ATGCCCCGCG CTGGGCCGCC CCCTTGAATT CGGTGCATCG GCTACCGGAT CGCCTGCGCT TCGAAGGCCA GTTCCTGCCT GCAGCACTGC GCGACGCCGG TATCCAGATC TACGTGGCCA ATATCAACAT GGGCCTGCCG CTGGGGCGCA AACCGGCCGA TATACGCTAC GTATTGCAAC TGCACGATCT GTTTCAGCTC ACGCAGCACA ACAGTCACGG TTCGCGACTC AAAGCCAGGA TCTACCGGAT GACCGACTAC CTGTCGATTG CCTGGTCGCT GAAGGTTGCC GACCAGATCT GGGTGCCTTC GCAATTCACG GCAAACGAAG CTGCTCGTAT GTTCCCCAGG ATCAAGGCCA AGCTGCGCGT CATACCGCTG CTGGTGGAGG CGTTCAAGGG TGAGCCGGCC GACATCGCGC AACTGCACCT GCCGCTGCGT TACTGGCTGT GCGTGGGCAC GCGGGAACCG CGCAAGAACA TCAAATGGTT CGTGGATGCC TGGCAGACCG CGCGCATGCA ATTCGTCGAT ACCCCGGAAC TGGTACTGGT CGGTGGCGAC GATCCGCTGA CCGAGGCCCA GCGCCAGTTA CCAGGTCTGC ATGTGCTCAG CGGCCTGAGC GACGCCGAAC TGCACGCCGT CTACAAAAAT GCCGAACGGC TCTGGCAACC CTCCACAAGC GAAGGTTTCG GGCTGCCGGT GATTGAAGCG CTGAACAGCG GCACATCGGT TGCGGTGGCC ACGGGCTCGT CGCTGGATGA GGTCGCCCCG CCCGACAGCC CGCGCTTTTC ACCGCTCGAT AGCGGCAATC TGATCAGGTT GATGGGCACC CTGTCGCAGG CCCCCGAAGA AGATCCGGCG ATTGCCACAG AATGGACGCA GCGCTATCAG TTGAAAGCCT TTTGCGAGCG CGTGCACGCG GCGCTGGAGG AATTGCGCTG A
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Protein sequence | MRIGLDYRAA AGYPISGIGR QNLALEQAFR EHPDVQLQLF GVAPYDHPVR RVMHAPRWAA PLNSVHRLPD RLRFEGQFLP AALRDAGIQI YVANINMGLP LGRKPADIRY VLQLHDLFQL TQHNSHGSRL KARIYRMTDY LSIAWSLKVA DQIWVPSQFT ANEAARMFPR IKAKLRVIPL LVEAFKGEPA DIAQLHLPLR YWLCVGTREP RKNIKWFVDA WQTARMQFVD TPELVLVGGD DPLTEAQRQL PGLHVLSGLS DAELHAVYKN AERLWQPSTS EGFGLPVIEA LNSGTSVAVA TGSSLDEVAP PDSPRFSPLD SGNLIRLMGT LSQAPEEDPA IATEWTQRYQ LKAFCERVHA ALEELR
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